Clarias gariepinus (North African catfish): 128509042
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Entry
128509042 CDS
T10780
Symbol
lama2
Name
(RefSeq) laminin subunit alpha-2 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04510
Focal adhesion
cgar04512
ECM-receptor interaction
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128509042 (lama2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128509042 (lama2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128509042 (lama2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
EGF_laminin
Laminin_G_2
Laminin_B
Laminin_N
EGF_LMN_ATRN
Laminin_I
Laminin_II
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
128509042
NCBI-ProteinID:
XP_053336547
LinkDB
All DBs
Position
2:complement(48556513..48680866)
Genome browser
AA seq
3203 aa
AA seq
DB search
MRSLVVLALFVLLLCLSSAQLRGLFPAVLNLASMANISANATCGQSGAEMFCKLVEHVPG
QPVRNPQCRVCNQRSERYYEHHPIEFAIDGTNKWWQSPSIKNGMQYHYITITLDLHQVFQ
IAYIILKAANSPRPGNWVLERSLDGETFMPWQYYAITDTECITRFNITPRTGPPAYKHDD
EVICTSFYSKIHPLENGEIHTSLINGRPSADDPSPTLLSFTTARYIRFRLLRIRTLNADL
MTLALDNPRDVDPIVTRRYYYTIKDISVGGMCICYGHAKACPLNTHTKKLSCECEHNTCG
ESCDRCCPGYNQKPWMAGTFLRRHVCEKCNCHGKSDVCYYNQTVADMKLSLNIHGEYEGG
GVCLNCSDNTAGINCQSCNDGFYRPSQVSAHALRPCRPCSCDPRGSVSSICVPDDTQGSA
GQSAGSCRCKQGYAGQRCDSCAFGFTGFPECQRCNCSLEGSFNRDPCQLPCLCKENVEGD
NCERCKVGYYNLHGDRYSGCEKCYCSGVSSVCVESQWEHTNITEMSGWYLTDAEGEGQVW
AFPGVATPLHIIVNYEEAETRLTPPYYWNAPPYYLGNKILAYGGYLSYTVSCDEGRPIKM
SHGSDVIIEGSGLRLTDRHSEVVPAPRLAGAVRRRVSLRPESFRHLGSDAAVSKSDFISV
LLRLRHIRVRAAHCLQHSLSSVSMEVASADSRSGVQARSVEVCVCPHGYTGTSCETCAEG
YRRVNGTLHHGVCERCQCHGHTSHCDDITGRCLGCKHHTTGPNCNMCAPGYYGDATRGTS
YDCQPCACPLQDPSNNFSPTCHQGEDGQLVCDQCRVGYTGPRCERCDNGYFGSPGVVGGS
CRPCDCSGNLDLSATHSCDPVTGACLRCRDGYAGPSCEVCADGYYGDAVVAKNCQLCQCN
INGSVSEVCNKETGQCQCHQRVLGRACDQCTPGHWLDSGTCRVCMCSGRGSMSPRCDGEG
RCVCRPGFVGRRCDVVRRETQRPIQRIPLNQNWENRRGCPRGAYPAPTVPGTHLQTGSGC
VPCHCNSFGSKSFDCSESGQCRCQPGVTGQKCDRCAPGHFNFQEGGCTPCECSHVGNNCD
PGTGRCVCPPNTVGDRCEKCAPNHWGHDIATGCKACGCNVNGAVTQQCNVNTGCCFCRDQ
FKGEKCNECKLGYRNFPHCLSCDCSLSGSNAETCDAEAGMCACAERTGQCSCKMNVEGLR
CEVCKVGTFGLSVANPLGCSRCYCFGLSTSCTEAQGLIRMKLTLMPEQTVLPLVDKDNSK
EITFGITFQYPEIIANAEVIRQELAEPYYWKLPKQFRGSMITAYGGKLKYTIYYEARDET
GHASYEPQVIIRGGANRDKVMIRHLVEPQIGQLTRHEIDMTEHEWKHQDDKPMSREDFMD
VLFYIDYVFIRASHGNVMRQSRISEISLEVAEEGRSSVESERAHQIEKCECPQGYSGLSC
EECAAGFYRLSPQVSGSVFRSGMGSCVRCDCNGHSGSCDPDTGVCQNCQHNTEGEKCERC
SAGFYGIVRGALDDCKRCACPLTSPGNNFSPACVTEGFNDYRCTACPEGYEGKYCDRCAT
GYHGDPRRPGGRCEECECDPVGATPGPCDTHTGACQCRPGATGLKCDHCMDRHVCGPVDI
VSCDDDCAGLLIRDMDRLLRLIGGANLTLPLPPPYGALYRVENMTDELKHMLSPHRAPER
LLQLADSNLGSLVTEMDELLSRATKVSADGEQTDSDAERSRKRAEDLELFVKNTLLAAEA
LRDKARELNATLGRRDDGVEKSVNEMQKEIKAMIAELRARQLTHPHTHTVQEELRAAQDL
LLKIQRNFAAPHRVSEELQQEVDAKLRHHDDKLRGAQELLDQAQGDTGRARTLNSDNLRR
LEELKRKRDENNKQKKETEGVLEDGEKILNDANALSDNFNRGIEELEEMEREIGPLQDQL
DYRVSKLSRVVEDDTLPDLLQRAEGHAAQLNNSAAILDSILAEAKNLSFNATAAFNAYSN
IKNYIDEADKAAKQAKATATEAVQLATGPKGALKDEAKSSAQKSQHLWNEAKNLENAVRE
NRDNLGVLQLRLKGADAKNKDLLKGLKENLAMLRAIPNDTAAKLQATKQKAGKANDTAHE
VLARLKDMNQNLMGLNRNYSKLKDDINKANNLIQDPEKNIHAAGAKVKDLEDEAERLLEK
LKPIRELQDNLRKNISQIKELINQARKQANSIKVSVSSGGDCIRTYRPDVKRGNYNTIIL
NVKTLAADNLLFYLGSAKFVDFLAIEMRKGKVNFLWDVGSGVGRVEYSGLAINDGNWHRI
EASRMGLNGSISVRPLEGPKASIVPTWQSAKSPESYTLLDVDQNAYLFVGGMLGRVKKAD
AVKTITFSGCMGETYLDSKPIGLWNYRQRDGDCKGCVVSPQPADSEAVVQFDGEGYAAVS
RPIRWNPNSSTVTFKFRTFSTSAMMMYLATKDMKDFMSIELSEGRVKVSYDLGSGTGSAL
SQKRHNDGRWKSLTMTRSKKQGTVIILDIESNEEEKILVDSQGGATGLNLKEGEKIYFGG
LPTIGNYSSKSRSEVSLRRYAGCMKDIEVSRTPYNLLSSSDYTGLTKGCSIENVHTVSFS
KPGFMELSPMVFNVGSEITLSFSTKNENGIILYGRGGVTSLTRVAQDNFQRPGRKRRQTG
EPYVSVQLNKGALEVLVFSGSRNPRRIIRKPDGGILHDGLEHSLRIRRHPGGLFSVQLDE
EARLEQALPSDQPIAIQRLFVGGVPADMAGGLQRPGLPFEGCIWNLLINTIPMDFSQPVA
FENAEIGRCPDVAPPPPPPAPEEEEEEEEEEEEVTPPKLPTDTMKPPPSTATPPADVITV
PAVLPVDVPHTVVSCAVGAEPEVLELAKQFGLSRNSHMVFEFDDRKVKNSLIIEFELRTE
ADSGLVFYMARINHADFATVQVKEGMAHLSYDLGSGNTSVSVPRIINDGHWHKIKVRRDK
QRGILTVDGRYIKHTVSPKKADILDVVGNLYVGGLPLNYTTKRIGPVVYSINGCIRNFRM
TNGPQDLENPNSSYRVGTCFTKTQSGSYFSGTGYAKAVSTYRVGNDVTVELEFRTSSSSG
VLLGVSGQIMDGLGIELVNGKLLFHADNGVGRVTALAQGAELCDGQWHSVTAHKLKHRLE
LIVDGRKSEAASPDASSASADTNDPVYVGGYPEGLKQFGLTISTPFKGCMRNIKLIKAGK
VLEVQLNKALEIKGVQPLTCPAA
NT seq
9612 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcgctggttgtgctcgcgctgttcgtgctgctgctctgcctgagttctgctcag
ctccggggtctgttccccgcagtgttgaatctggcctccatggccaacatcagtgcgaac
gctacatgtggacagagcggagctgagatgttctgtaagctggtggagcacgtcccggga
caaccggtccgcaacccccagtgtcgagtgtgtaaccagaggagcgaaagatactacgag
catcacccgatcgagttcgccatcgacggcaccaacaagtggtggcagagtccaagcatc
aagaacggcatgcagtaccattacatcaccatcacgctcgacttacaccaggtttttcaa
atagcatacatcatcctgaaggctgcgaactctccgcgaccaggaaactgggtcctggaa
cgatctctggatggagaaacattcatgccttggcaatattatgccatcacagatacggaa
tgcatcacacgcttcaacatcaccccaagaactggaccaccagcttataaacatgatgat
gaagtcatctgtacatcattttactctaaaatccacccgctggagaatggagagatccac
acttctttgataaacgggcgtccgagcgctgatgacccatcgccaacactgctcagcttc
accacagctcgctacatccgcttccggcttcttcggatacgtactctgaacgctgacctc
atgaccctggccctcgacaacccccgagatgttgaccccattgtcaccagacggtattat
tacaccattaaggacatctcagtgggtgggatgtgtatctgctacggccacgccaaagcc
tgtcctctcaacacacacaccaagaaactgagctgcgaatgtgagcacaatacctgcgga
gaaagctgtgatcgctgttgcccaggctacaaccagaaaccctggatggctggaaccttc
ctcaggcgccacgtctgtgagaagtgcaactgccatgggaaatcagatgtgtgttactat
aaccaaaccgtagctgacatgaaactgagtttgaacattcacggtgaatatgaaggaggc
ggagtctgtctcaactgctctgacaacacagctggaattaactgccagtcgtgtaatgac
ggcttctacagaccaagccaggtgagtgcacatgctctccgaccctgtagaccctgctca
tgtgaccctagagggtctgtctcatccatctgtgtacctgatgatactcagggcagtgca
ggccagtccgcaggttcttgccgctgtaagcagggctacgcgggtcagaggtgcgacagt
tgtgcttttggctttaccggatttccggagtgtcagcgctgcaactgtagtttggagggc
agctttaatagggacccctgccagctcccgtgtttgtgcaaggagaacgttgaaggggat
aactgtgagcggtgtaaggtgggatattataatctccatggcgaccgttacagcgggtgt
gagaagtgttactgctccggagtctccagcgtgtgtgtggagtcgcaatgggaacacaca
aatatcactgaaatgtccgggtggtatttgacggacgcagagggggagggacaagtgtgg
gcgttccctggtgtggccacgccccttcacataattgtcaattacgaagaagctgaaacg
cgcttgaccccgccctattactggaatgctccgccctattacctggggaacaagattttg
gcgtatggaggttatctgtcatacacagtttcctgtgacgaaggcaggccaatcaaaatg
tcccatggctctgatgtcatcatcgagggcagcggtctgcgtttgacggacagacactca
gaggtggttcctgctccacgattagctggagcggtgaggaggcgggtctccctgagacca
gagagtttccgtcacctcggttctgatgcggcggtcagtaagagtgacttcatcagtgtg
ctgctgagactgagacacatccgagtgagagcagcacactgtctccaacacagtctgtcc
tcagtcagtatggaagtcgcctctgcagactctcgctccggagttcaggcccgatctgtc
gaggtctgtgtgtgtcctcatggctacaccggcacttcctgcgagacgtgtgcggaaggc
tacaggagagttaatggaaccctacaccatggtgtgtgtgagcgctgtcagtgccatggg
cacacgtcacactgtgatgacatcactggacgctgcctgggatgtaaacaccataccaca
ggcccaaactgtaatatgtgtgcccctggttactatggcgatgctaccagaggaacctca
tatgactgccagccctgcgcctgccctctccaggatccctccaacaacttcagtccaacc
tgccaccagggcgaggacggtcagctggtctgtgatcagtgccgagtgggttacaccggt
cctcgctgtgagagatgtgataacggttacttcggatctcccggagtcgtgggaggttcc
tgtcgtccatgtgactgcagtgggaatttggacctctctgcgacccatagctgtgacccg
gtaacgggggcgtgtctccgttgccgtgacggttacgctggaccaagctgcgaagtgtgt
gcagacggttactatggagacgccgtagtagccaagaactgccagttgtgtcagtgtaac
attaacggatctgtctctgaggtgtgtaacaaggagaccggacagtgtcagtgtcaccag
cgtgtcctgggccgagcgtgtgaccagtgtactccgggccactggttggactctggcaca
tgcagggtgtgtatgtgtagtgggcggggctccatgtcaccgcgctgtgacggtgagggc
aggtgtgtgtgtaggccgggcttcgtgggccgcaggtgtgacgtagtgaggagagaaaca
cagcgtccgattcagagaatccctctgaaccagaactgggagaacaggaggggctgccct
cggggggcttaccctgccccaacggtgcctgggacgcacttgcagacaggtagtgggtgt
gtcccgtgccactgtaactcgttcggctctaagtcgtttgactgcagtgagagcgggcag
tgtcggtgtcagcccggagtcacgggacagaaatgtgaccgctgtgctccaggacacttc
aacttccaggagggagggtgcacaccgtgtgagtgttctcatgtggggaataactgtgac
ccggggacaggtcgctgtgtctgtccacccaacacagtgggggatcggtgtgagaagtgc
gctcctaatcactggggtcacgacatcgccactggctgcaaggcgtgtggctgtaacgtg
aatggcgcggtcacccagcagtgtaacgtgaacacgggatgttgtttttgtcgggatcag
tttaagggagagaagtgtaacgagtgtaagctgggctacaggaacttcccgcactgcctt
tcctgtgactgctcgctctctggctccaacgccgaaacgtgcgatgctgaagcgggcatg
tgcgcgtgtgccgagaggaccggacagtgctcctgcaagatgaacgtggaaggtctgagg
tgtgaggtgtgtaaggtggggacgtttggactgagtgtggcgaatcctctcggctgcagc
cgctgttactgcttcggcctgagcacgagctgtaccgaggcccagggactgatccgcatg
aagctcacgctgatgccagagcagacggtgctccccctagtggacaaagacaacagcaag
gagattacatttggaataacattccagtatcctgaaatcatcgctaacgctgaggtgatt
cgtcaggaactagccgagccgtactactggaagctcccgaagcagttcagagggtccatg
ataacagcatacggagggaaacttaaatacaccatttattatgaagcacgggatgaaaca
ggccacgcctcctacgagccacaggtcatcattaggggtggagccaacagagacaaagtc
atgatacgccatttggtggaaccacagattggtcagctgacccgccatgaaatcgacatg
acagagcacgagtggaaacaccaggacgacaaaccgatgagccgagaggatttcatggat
gttctgttctacattgattatgttttcattagagcatcacatggcaatgtcatgagacaa
agcaggatctcagagatctccctggaggtggcagaggagggccggtcctcggtggagagc
gagcgagcgcatcagatcgagaagtgcgagtgtcctcagggatactccgggctttcctgt
gaggagtgtgccgcagggttctacagactctcccctcaggtctccggctcagtcttcagg
tcagggatgggaagctgcgttcgatgtgactgtaacggccacagcggctcctgtgacccg
gacaccggtgtgtgtcagaattgtcagcacaacacagaaggagagaagtgtgagaggtgt
tcagctggtttttatggcatcgtacgcggcgctcttgatgactgcaagcgctgtgcctgc
cctctcaccagcccaggaaacaatttcagtcctgcatgtgtgacagaggggttcaatgat
taccgctgcaccgcgtgtcctgaaggctacgagggaaagtactgtgacaggtgtgccact
ggttaccatggcgacccgcggcgaccaggcggccggtgcgaggagtgtgagtgtgacccg
gttggcgcgacgcccggtccgtgtgacacacacacgggggcgtgtcagtgccgacccgga
gctacgggcttgaagtgtgaccactgcatggaccggcatgtgtgtggaccagtggacatc
gtgtcatgtgacgatgactgcgcggggctcctcatcagagacatggatcggttgctaaga
ctgattggcggagcaaatctgacattgcccctccccccaccatatggcgctctctaccgc
gtcgagaacatgaccgacgagctcaagcacatgctgtctcctcatcgagctccagagcgc
ctcctgcagttagcggacagtaacctgggcagtttggtcaccgagatggacgagttactg
agccgggccacaaaagtatcagcagacggagagcagacggattccgatgcggagaggagt
cgcaaacgagctgaagatctcgagctgttcgttaagaatacactccttgctgctgaagct
ctgcgtgataaggcccgggaactcaacgccactttgggtcggagggacgacggcgtggag
aagagtgtgaatgagatgcagaaggagatcaaggccatgatcgctgaactccgtgcacgg
caactcacacacccgcacacacacaccgtgcaggaggaactcagggctgctcaggatctc
ctgttgaagattcagcgtaacttcgcggctcctcaccgcgtatctgaggagctgcagcag
gaagtcgacgccaaactgcgacaccacgacgacaaactgcgcggcgctcaggagctgctg
gaccaggctcagggcgatacgggccgcgctcgcacgctgaacagtgacaacctgcgcagg
ctggaggagctgaagagaaaaagggatgagaataataaacagaagaaggagacagaggga
gtcctggaggatggagagaagatcctgaatgatgcaaacgctctctcagacaacttcaac
cgtggcatagaggagctggaggagatggagcgcgagatcggaccgctgcaagatcagctc
gactacagagtgtccaagttgtcccgggtcgtggaggacgacacgctgccggacctgctg
caaagagcggaaggccacgccgcacagcttaacaactccgccgccatactggacagcatc
ctggccgaggctaagaacctctccttcaatgccacggccgcgttcaacgcctacagcaac
atcaagaactacattgacgaggcggataaagcggccaagcaggcgaaagctacggctaca
gaggccgtgcagctggccacgggacctaagggtgccctgaaagatgaggctaagagctcg
gcccagaaaagccagcatctgtggaacgaggccaagaacctggagaacgccgtgagagag
aacagagataatttgggagttctgcagcttcggctcaaaggcgccgatgccaagaacaaa
gacctgctgaagggcctgaaagaaaacttggcaatgctccgagccatccctaacgatacg
gctgccaagctccaggccacgaaacagaaagcaggcaaagctaacgacacagcgcatgag
gttctggctcggctcaaggacatgaaccagaacctgatggggctgaatcgcaactacagc
aaactgaaagatgacatcaacaaagccaacaacctcatccaagaccctgagaaaaatatc
catgcagccggtgctaaagtgaaggacctggaggacgaggcagagcgcctgctggagaag
ctgaagccgattcgcgagctgcaggacaacctgcggaaaaacatctcgcagattaaagag
ctcattaaccaggctcgcaagcaggccaactctatcaaagtgtcagtgtcctctggggga
gactgtatccgcacctacaggccggacgttaagagaggcaactacaacaccatcatcctg
aacgtcaagacgctcgctgcggataacctgctattctacctcggctcagccaaatttgtg
gatttcctggcgatcgagatgaggaagggcaaggtgaacttcctgtgggacgtggggtca
ggggtcggccgagtggagtattccggcctcgccattaacgatggaaactggcacaggatc
gaagcctcacgtatgggtctgaacggcagtatttctgttcggcccctggagggccccaaa
gcgagcatcgtcccaacctggcagagtgctaagtcacctgagagctacacgctgctggat
gtggatcaaaacgcttacctgttcgtaggaggaatgctgggccgtgtaaagaaagctgat
gcggtaaagacgatcaccttctctggctgtatgggagagacgtacttggacagtaaacca
atcggactgtggaactacagacagagagacggagactgtaaaggatgtgtggtcagtccc
caacctgctgactctgaagccgtggttcagttcgatggcgagggttatgctgctgtcagt
cgtcccatcaggtggaaccccaacagctccacggtgacgttcaagttccgcactttctcc
accagtgccatgatgatgtacctggctaccaaggacatgaaggactttatgagtatagag
ctgagtgaaggtcgcgtgaaggtcagctatgatcttgggtctggtaccggctcagcgctc
agccagaaacgacacaacgatggacgatggaaatcgctcaccatgactcgctccaaaaaa
caaggcaccgtgatcatccttgacatagaaagcaatgaggaggagaaaattcttgtagat
tcccagggaggagcaacaggcctcaacttaaaggagggcgagaaaatctactttggaggt
ttacctaccatcggaaactacagtagcaaatcaaggtctgaggtatccctgaggagatac
gctgggtgtatgaaggacatcgaagtttcccgaacaccttacaacctcctgagcagctca
gactacactggtctcaccaaaggctgcagcatagagaatgtccacacagtcagtttctcc
aaacctgggttcatggagttaagcccgatggtgtttaatgtcggctcagagattacgctg
tcctttagcaccaagaacgaaaatgggattatcctatatggtcgaggcggagtgaccagc
ctaacccgcgtcgcccaggacaacttccagaggccaggacgcaaacgcaggcagaccgga
gagccctatgtgtcagtgcagttgaataagggagctctagaggtgctggtgttcagtggc
agcaggaaccctcgccgcatcatcagaaaacctgatggagggattttacatgatggactc
gagcactcactgcgtatccgccggcacccaggaggcttattctcagttcagttggatgaa
gaggcgcgactagagcaggcattacccagtgatcagccaattgccatacaaagactgttt
gtgggcggagtcccggcggacatggcgggtggcctgcagagacctggcctgcctttcgag
ggctgcatctggaaccttttgatcaacacgatccccatggacttctcccaaccggtggcc
ttcgaaaacgctgaaattggccggtgtccagatgtagccccaccccctcctcctccagct
cctgaagaagaggaggaagaagaggaagaggaggaggaagtgactccacccaaattaccc
acggatacaatgaaaccaccaccttccacagccacgcctcctgctgatgtcatcaccgtt
cctgctgtgctgcctgtagatgtgcctcacactgtggtgtcctgcgcagtgggggcggag
cctgaagtgctggaattagctaagcagtttggtctctcgaggaacagccacatggtgttc
gagttcgatgacaggaaggtgaagaacagcctgatcattgagttcgagctgaggacggag
gcagattccgggctggtgttttacatggccagaataaaccatgccgacttcgcgacagtt
caggtgaaggagggaatggcccacctgagctacgacctcggcagcgggaacacgtctgtc
agcgtcccacgtatcatcaacgacggacactggcacaagattaaagtgcgtagggataaa
cagaggggcatcctgacagtcgacgggcgttacatcaaacacaccgtgagcccgaagaaa
gccgacatcctggacgttgtggggaatctgtatgtgggaggacttcctctaaactacacc
accaagcgcataggaccggtggtgtacagcattaacggctgcatcagaaacttccggatg
acgaatgggccacaggacctggaaaatcccaactccagctaccgcgtgggcacgtgcttc
accaaaacgcagagtggctcatacttcagcggcacgggatacgctaaagcagtgagcacc
tacagagtcgggaacgatgtgacagtggagctggagttccgcaccagcagcagcagcgga
gtcctgctcggagtcagcggccagataatggacggactcggcatcgaactcgtcaacggc
aagctccttttccatgctgataacggagtggggcgtgtcacggccctggcccaaggggcg
gagctttgtgatggacagtggcattctgtcactgcccacaaactgaagcaccgcctcgag
ctgattgtggatggcagaaaatccgaagcagccagtccggacgctagctccgcctccgcc
gacaccaacgaccctgtctacgtgggcgggtatcctgagggcctgaagcagtttggtctg
accatcagcactccctttaaaggctgcatgagaaacataaagctgattaaagcaggaaaa
gttctggaggttcagctcaacaaagcactggagatcaaaggggtccagcctctcacttgt
cctgctgcatag
DBGET
integrated database retrieval system
