Clarias gariepinus (North African catfish): 128509108
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Entry
128509108 CDS
T10780
Symbol
thbs4a
Name
(RefSeq) thrombospondin-4a
KO
K04659
thrombospondin 2/3/4/5
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04145
Phagosome
cgar04510
Focal adhesion
cgar04512
ECM-receptor interaction
cgar04820
Cytoskeleton in muscle cells
Brite
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Phagocytosis
Opsonins
128509108 (thbs4a)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128509108 (thbs4a)
Exosomal proteins of colorectal cancer cells
128509108 (thbs4a)
Exosomal proteins of bladder cancer cells
128509108 (thbs4a)
Glycosaminoglycan binding proteins [BR:
cgar00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128509108 (thbs4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128509108
NCBI-ProteinID:
XP_053336656
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All DBs
Position
21:15356539..15368775
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AA seq
982 aa
AA seq
DB search
MNRSRDTAFLLFLLRESSKMGLWARVLFSLHVVMQLTYMVTSQGIVYDLLASPDCLPDLL
QGGLKDKNVNDVYILTTFQVQNKAPMHIFRIYNPTDNTDILDFSVYGKLNKVSLRYLKIN
GKIGTANFLKVPLADGRPHNVLLHFSGLIHGTPRMLLYVDCRLVEIVEELPAALKTLPPG
PNQVALKTMPSTSEDSVLDLKLVLGESIENVVELQDCSHLQGESIQLLGLSSKPEPVIFD
LVQMIQELKGKMDQQIQETANLRKILMECVPCDGQNTGKTDEDSHTKCAPGVCFQQSMCT
ETEQGVKCAPCPEGYVGNGVHCEDVDECQFNPCFPGVRCVNTVPGFQCERCPRGYSGPEL
QGVGIVYAQLRKQVCNDIDECLSVDNGGCVSNSYCQNTMGSFICGDCKPGFTGDQIRGCK
YNPESELGPTDPVETAELNRLCANGERNPCDLNAECIVERDGSISCVCNIGWAGDGYVCG
RDTDIDAYPDKKLPCQETYCKKDNCIFVPNSGQEDADGDGRGDACDEDADDDGIINEKDN
CWLKPNTDQKNSDGDAHGDACDNCLKVNNPDQRDTDQDGLGDDCDDDMDGDGVKNILDNC
QRVPNRDQLDSDNDGVGDVCDSCPDVPNPNQSDIDDDLVGDTCDTNTDSDGDGHQNTKDN
CPTVINSSQLDTDKDGLGDECDDDDDNDGIPDKQDNCRLVPNVDQADKDNDNVGDACTGD
FDQDRVIDRIDPCPENAEITLTDFRAYQTVVLDPEGEAQIDPNWVVLNQGMEIVQTMNSD
PGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQAVPF
RAVAEPGIQLKAVKSKTGPGEFLRNSLWHTGNTEHQVRLLWKDPRNVGWKDKVSYRWNLQ
HRPQVGYIRVRFYESASLVADSGVVIDTSMRGGRLGVFCFSQENIIWSNLKYRCNDTIPE
DYQDYIAQDSTRKEDTQDNTTQ
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggtctagagacacagcatttcttctatttcttctacgtgaatcatcaaaaatg
ggcttgtgggcacgagtattgtttagtttacatgtggttatgcagctaacctatatggtg
acctcccaaggaattgtctatgatctcctggcatcaccagattgtttgccagatctccta
caaggaggactgaaggataagaacgtgaatgacgtttatatcctgacaacctttcaggtc
cagaataaagcgccaatgcatatttttcgcatttacaaccctacagacaacactgacatt
ttggatttctcagtatacgggaagctcaacaaagtgtctctgaggtatctgaaaataaat
ggaaaaataggtacagctaatttcctcaaagtgcccctggctgacggccggccacacaac
gtcctgttgcacttcagcgggctgatacatggcactcctcgcatgcttctgtatgtggac
tgtaggctggtggagatagtggaggaattgccagctgccttgaagacactaccacctggt
cctaatcaagtggcactaaaaaccatgcccagtacatcagaggacagtgtgttagacctt
aagctagttttgggtgaatcgatagaaaacgttgtggagcttcaagactgttctcacctg
cagggtgaatcgatacaattattgggcctctcatctaagccggagccagtcatatttgac
cttgtgcagatgatccaagaactgaaagggaaaatggaccagcagatccaggagactgca
aatttaagaaaaatacttatggaatgtgttccatgtgatgggcaaaacacaggcaagact
gatgaggactcccacaccaagtgtgctccaggagtgtgctttcagcagagtatgtgtacg
gagaccgagcaaggtgtcaagtgtgcaccgtgtcctgaaggctatgtaggaaatggagtc
cactgtgaagatgtagatgagtgtcagttcaacccatgtttccctggtgtacggtgcgtt
aacacagtcccaggattccagtgtgagagatgtcctagagggtacagtgggccggagttg
cagggtgtgggcatcgtctacgcccagttacgcaagcaggtctgtaacgatatagacgag
tgtctaagtgtggacaacggaggctgcgtttctaattcctactgccaaaatacaatgggt
tcattcatctgtggagactgtaagcctggtttcactggagatcaaataagaggctgcaag
tacaaccctgaaagcgaacttggtcctactgatcctgttgagactgctgaactcaacagg
ctgtgtgcgaacggtgagcgcaacccatgcgacctcaacgctgagtgcatcgtggagaga
gatggaagcatcagctgtgtgtgcaacatcggctgggccggtgatggctatgtgtgtgga
agggacacggacatcgatgcttaccctgacaaaaaacttccatgccaggaaacatactgc
aaaaaggacaactgcatatttgtacccaattcaggccaggaagacgcagatggtgatgga
agaggtgacgcctgcgatgaagatgcagacgatgatggcatcatcaacgagaaggacaac
tgctggttgaaaccaaacacagaccagaagaacagcgatggagatgctcatggtgacgca
tgtgacaactgcttaaaagtaaataaccccgaccagagggacacagaccaggatggactg
ggagacgattgtgatgatgacatggatggtgatggagtgaaaaacattttggataactgc
cagagagttcccaaccgtgaccagctggacagtgataatgatggtgtaggagatgtttgt
gacagctgtcctgatgtgcccaaccccaaccagtcagacattgacgatgaccttgtagga
gacacttgtgataccaacactgacagtgatggagacggacaccagaacaccaaagataac
tgccctacagtcatcaacagctctcagttggacacggacaaggatgggcttggggacgaa
tgtgatgatgatgatgataatgacggcatccctgataaacaagacaactgcagattggtg
cccaatgtagaccaagcagataaagacaatgacaatgtgggcgacgcctgtactggagac
tttgaccaggaccgggtgattgacagaattgacccctgtcctgagaatgcagagatcacg
ctgacagacttcagggcgtatcagacagtggtgctggaccccgagggcgaggctcagatt
gaccctaactgggttgtccttaatcagggcatggagatcgttcagacgatgaacagcgat
ccaggactcgcagtgggttacacggcgttcagtggcgtggatttcgagggaaccttccat
gtgaacacggtgactgatgatgactacgccgggttcatctttggctaccaggactcttcc
agtttctacgtggttatgtggaagcagacagagcagacctactggcaggctgtgccattc
agagctgtagctgaacctggcatccagctcaaggctgtgaaatccaagacagggcctggc
gagtttctgaggaattctctgtggcacacggggaacaccgagcatcaagtgcggcttctg
tggaaagatcctcgcaatgtgggctggaaggacaaggtttcataccgctggaacctgcag
catcggcctcaggtcggatacatcagggtccggttttatgaaagcgccagtctggtggca
gactccggcgtggtcattgacacaagcatgaggggtgggcgtcttggtgtattctgcttc
tcccaggaaaacatcatctggtctaatctgaagtatcgctgcaatgacacaatccctgaa
gactaccaggattacattgcacaggactccaccaggaaagaggatactcaggataatact
acacagtaa
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