Clarias gariepinus (North African catfish): 128509121
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Entry
128509121 CDS
T10780
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30-like isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128509121
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgar01002
]
128509121
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128509121
04121 Ubiquitin system [BR:
cgar04121
]
128509121
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
128509121
Peptidases and inhibitors [BR:
cgar01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
128509121
Membrane trafficking [BR:
cgar04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
128509121
Ubiquitin system [BR:
cgar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
128509121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
128509121
NCBI-ProteinID:
XP_053336678
LinkDB
All DBs
Position
21:9457856..9467229
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AA seq
503 aa
AA seq
DB search
MSWCGPEATDELLREFLRIRSSARNRMMKNWGVIGGIAAAMAVGVYVLWGPSADRKKRRR
GMVPGLMNLGNTCFLNALLQGLATCPSLISWLQDFTTNSSSCLSGMECGETEEQTETQTE
AQTETRTETQTDNRVSKTLLQLLSALSSPDPGEDDVLDAGCLLEALRLYRWHISSFEEQD
AHELFHVLTSTLEEERERQPRVTHLFDMETLEKSAETSENPASCWSRGPLHPVPSLWRTQ
HPFHGRLTSYMACKRCERQSPVRYDSFESLSLSIPAVQWGRPVTLDQCLQHFISSETIKE
VECENCTKKQAKTEDSHVPESQRTTFVKQLKLGKLPQCLCIHLQRLTWSPEGAPIKRHEH
VQFSEYLSMDRYKHRSTTQKTSRSKKHTAEEPRDQNGVDPEHHNNNKPLSNGSISSAFLR
PGALGPQLDLVHDFSSAEYLFRLTAVLVHHGDTHSGHFVTYRRGPASFSPQWLWVSDESV
RKASLQEVLSSSAYLLFYERVRK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcttggtgcggacctgaggccacagacgagctgcttcgcgagtttctccgcatacgg
tcctctgccagaaacaggatgatgaagaactggggtgtgatcggaggcatcgccgctgcc
atggcggtcggggtgtacgtcctctggggtccaagcgcagacaggaagaaaaggaggcga
ggcatggtgccggggttgatgaacttgggaaacacatgctttctgaacgcactgctgcag
ggtctggctacgtgtccttcgctcatcagctggctccaggacttcaccacaaacagcagc
tcctgtctctctggcatggagtgtggcgagacggaagagcagacagaaacgcagacagaa
gctcagacagaaactcggacagaaacgcagacagacaacagagtttccaaaacactacta
cagctgctttcagctctgtccagtcctgaccctggagaagacgatgttttggatgcaggg
tgtctcttagaagctcttcgtctgtacaggtggcacatcagctcattcgaggaacaggat
gctcacgagcttttccacgtcctcacgtcgactctggaggaggagcgcgagcgacagccc
agagtcactcacctgtttgacatggagacgctggagaaatcagcagagacgagtgaaaac
cctgccagctgttggagtcgaggtcctctgcaccccgttcccagcctttggaggacacag
cacccgttccatggacgcctgaccagctacatggcctgcaaacgctgcgagcgccagagt
ccagtgcgttacgattcattcgaaagcctctcgctgtccattcctgctgtgcagtggggt
cggccggtcactctggatcagtgtcttcagcacttcatctcctcagaaacgattaaagag
gtggagtgtgagaactgcaccaagaagcaggccaagactgaggacagtcacgtcccggag
agccagaggacgacattcgtgaagcagcttaaactcgggaagctaccccagtgtttgtgt
attcaccttcagagactcacctggtctcccgagggcgctcctattaagagacatgagcac
gttcagttctcagaatacctcagcatggaccgttataaacaccgcagcaccacacagaaa
accagcaggagcaaaaaacacacagcggaggaaccgcgtgaccaaaatggagtcgaccca
gagcatcataacaacaacaagccgttgtcgaatggcagcatctcctctgcattcctccgt
ccaggagcactcgggcctcagctcgacctcgtgcatgactttagctcggcggagtacctg
ttccggctgacggcggtgctcgtgcaccacggcgacacgcactcaggtcacttcgtcaca
taccgccgcggcccggcgtcctttagcccgcagtggctctgggtttcagatgagtcggtg
cgtaaggccagtctgcaggaagtgctctcgtccagtgcgtacctgctgttctatgagcga
gtacgcaagtga
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