Clarias gariepinus (North African catfish): 128509187
Help
Entry
128509187 CDS
T10780
Symbol
prdm11
Name
(RefSeq) zinc finger protein 862 isoform X1
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128509187 (prdm11)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128509187 (prdm11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
FOG1-like_PR
DUF4954
Motif
Other DBs
NCBI-GeneID:
128509187
NCBI-ProteinID:
XP_053336790
LinkDB
All DBs
Position
2:30879450..30895873
Genome browser
AA seq
1153 aa
AA seq
DB search
MKTGQGLALHPALTMEDSAAFHTEPCMETEPECSTGAVIDGSSEEPKEKKVNHERRVNVE
QRNVDCWFCEECKEYFLEECRIHGSPVFVPDTPTALGVPDRAVLTVPSGIQIVGEGQDVD
VCCMDENIPKGALFGPYQGQLIGAHDKPSGKYSWMIVCEGNAYKTIDGCDVTIANWMRYI
RMSSEEGERNLSAFQHGEHIYFRVCRRMAAGEKLRVWYSDEYTKRLQSMTQDSTNRKPDT
GLNSVDITQHQEEAKGPLLRSSLHGRRTFIKHGSDEADSQPQVKKKKIDLIFKDVVEASL
EASQCQDNPLNSTLSLPRPKGSNVFSQSSTFSPNVMETIMGQTERKVPLAPCGLVPVKQL
ETSLERYVKVEDVQEEPTMISEGPSTSFCPNCVRLKRRIRELEAELLHFKQQEQTETLGL
TPSESLPTDDLRVVEAMTPITTVMEEDDQDVDSADESITADMIVAADDSSKLSVSPGRRI
RRFKQEWLKKFWFLRYSPTLNEMWCHVCRQYTVQSSRTSAFIIGSKQFKIHTIKLHSQSN
LHKKCLQLYKLRMHPEKTEEMCRNMMTLFNAAYHLAVEGRPYSDIRPLAELLKKCELKVV
DQYMNESDCQILIHHISRAFKEDLVEKIRLSPYLGVIMDGQNDDLLADTVAVYVQFISTE
GPTATEFVSLQRLSGSSVDGYLQAIDCAFGVLGLRLQDMLVVGLGIDGSNISSSLRTNLY
VAIRKIFPFILCLPVMIHRPHLEILDSICGKELSCLDDLETNLKHLLSFYRYSPRMMTEL
RSTAPTLSEETEFLGDIRAVRWIIGEPNVLNALIKDYLEVVSHLKGISGQTQRADAAAIA
LSLLQFLMDYQSVKLIYFLLDIIAILSRLAFIFQGDYLLVSQVDAKIVEAIHEIGQLVDS
PGEYLQEFEDNFRESFNGVELKNLRVAESKFQSIREKICQKTQGILAQRIDQNSHSVVQA
CKVLDLSSWPHNREDLQTYGEEEIDLIFDHLETIPLSGRELLHTDRVDLRASLIREWRDL
KADYFSMNGFKEVMSHVCKYKQRFPLLNQILQLLKVLPTSTVCCDKGRESLHKVRRNNHS
RLTLEQMNDLLTLAVNGPPIASFDGKRPLDSWFEEKSGNSYTLSAEVLSRLSNTEQKPVL
HSMDVNSEFYPGI
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaggtcagggtttagcccttcatcctgcattgaccatggaggactctgctgcc
tttcacactgagccatgtatggaaactgagccagaatgcagtacaggtgctgtcattgat
ggatcttctgaggagcctaaagagaaaaaagtgaaccatgagcgtcgtgtgaatgtggaa
caacgaaacgttgattgctggttctgtgaagaatgtaaggagtatttccttgaggaatgt
cgaattcatggttcgcctgtctttgtgcctgatacacccactgcgctcggagtgcctgat
cgtgcagttctcactgtgccttccgggattcagatcgttggagaaggtcaggacgtggat
gtgtgctgcatggatgagaatatccctaagggagctctgtttggcccgtaccaaggccag
cttataggagcccacgacaaaccgtcaggaaaatactcctggatgattgtctgcgaaggt
aacgcctacaaaaccattgatggctgtgatgtaactatagcaaactggatgaggtacatc
cggatgtcttcagaggagggcgagagaaacttgagtgcgttccagcatggtgagcatatt
tacttccgtgtgtgtcgcagaatggcggccggggagaagcttcgtgtttggtacagtgat
gagtacacaaagcgtctacagagtatgacccaggacagcaccaaccgcaagccagacaca
ggtctaaattcagtagacatcacccaacaccaagaagaagccaagggcccactcctacgc
tcaagtttacatggaaggagaacctttataaaacacgggagcgacgaggcagacagccag
cctcaagtgaagaagaaaaaaatcgatctcatattcaaagatgttgtagaggcatccctg
gaagcaagccaatgtcaagacaatccattaaacagcactctatcgttaccaagaccaaag
ggcagcaatgtctttagccaatccagtacattttcaccaaatgttatggagacaatcatg
ggccagacggagagaaaagtgcctcttgcgccatgtggacttgtgcctgtaaagcagcta
gagactagtcttgaaagatatgtcaaagtagaggatgtacaggaagagcctacgatgatt
agtgaagggccatccacatctttttgcccaaactgtgttagactgaagagacgtatacgt
gaactggaagcagagctgcttcattttaaacagcaagagcagacagagactttgggcttg
acgccatctgaatccttgccgactgatgacctgagagtggtcgaggcgatgacacccatt
acaactgttatggaagaggatgaccaggatgttgactctgcggatgaatccataactgcg
gacatgatcgtagcggccgacgactcctcaaaactgtctgttagcccaggtcgccgaatc
cgccgctttaaacaagagtggctaaagaaattctggttcttacgttattccccgacattg
aatgagatgtggtgccacgtgtgccggcagtatactgtacaatcatcaaggacttcggct
ttcattatcgggtccaagcagttcaaaatccacaccatcaagcttcacagccagagcaat
ctccacaaaaagtgtctgcagttatacaagttacgcatgcatcctgagaagacagaagag
atgtgtcggaacatgatgacgctgtttaatgctgcttaccatcttgctgttgaaggacgg
ccgtattctgacatccggccgttggctgagctgttaaaaaagtgtgaactaaaagtagtt
gatcagtacatgaacgagagcgactgccagattcttattcaccatatttcccgagcattt
aaagaagacttggtagagaagatccgtctctcaccttaccttggtgtaatcatggatggg
cagaatgatgatttgctagcagacaccgttgcagtttacgtgcagttcatttccacagag
ggcccaacggctactgaatttgtctctttgcagagactgagtggtagcagtgtagatgga
taccttcaagctattgactgtgcctttggtgtcctaggtctacggctgcaggacatgctt
gtggttggtttaggaattgatggttccaacatctcttctagccttcggacaaacctctat
gtagccatacgaaagattttcccgtttatcttatgtcttccagtaatgatccatcgtccc
catctagagatactggattccatctgtggcaaggagctgtcgtgtttagatgacttggag
accaacttaaagcatttgttaagcttttatcgatactcccctcgtatgatgaccgaactg
aggtcaacagcacctactctgtctgaggagacagagttccttggggacatacgagcagtt
cggtggatcataggcgagcctaatgtcctaaatgccctcatcaaggactatctagaagtg
gtgagccatcttaaaggcatcagcggtcagacccaaagggcagacgcagccgccattgct
ctttctctcttgcagttccttatggattaccagtctgtgaagcttatctatttccttttg
gatatcattgctatcctgtcacgcctcgcctttatttttcagggagattatctactagtt
tctcaagtggatgccaagattgtggaagccattcatgagatcggtcagctagtcgactcg
ccaggagagtacctgcaagagtttgaggacaatttccgtgagagcttcaacggagtagag
ctcaagaacctgcgggtggccgaatcgaagttccagtccatccgagaaaaaatctgccaa
aagacccagggaattttggcccagcgcattgatcagaacagccattctgtcgtgcaggct
tgcaaggtgcttgacctgtcttcatggccacacaatcgggaggatctccaaacctatgga
gaggaagagatcgacctcatttttgaccacctggagacaattcccttatcaggtcgggag
ctgttgcacacagacagagtggatttacgagcaagcctgataagagaatggagggatctc
aaagccgactacttcagcatgaatggctttaaggaagtaatgagtcatgtctgcaaatat
aagcagcgatttcccttgctcaatcaaatcctgcagttgttgaaggttttgccaacatcg
actgtctgctgtgacaaaggacgggagtctttacacaaagtaagaaggaataaccactcc
agacttactctggaacagatgaatgacctgcttacgttggctgtcaacgggccacctatt
gccagctttgatggcaagaggccactagacagctggtttgaggaaaagtcggggaatagt
tacacactttctgcagaagtgttgagcagactgtccaacactgaacaaaaacctgtgctg
cactccatggatgtgaattcagaattttatcctggtatttga
DBGET
integrated database retrieval system
