Clarias gariepinus (North African catfish): 128509228
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Entry
128509228 CDS
T10780
Symbol
scarb2a
Name
(RefSeq) lysosome membrane protein 2a
KO
K12384
lysosome membrane protein 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
128509228 (scarb2a)
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Motif
Pfam:
CD36
Rcr1-2
TMEM51
DUF7657
Ly49
Motif
Other DBs
NCBI-GeneID:
128509228
NCBI-ProteinID:
XP_053336825
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Position
21:15954893..15968203
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AA seq
530 aa
AA seq
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MRRSCAIYATGIVCAHLLIVGIALMVAQVFQTMIQERIKKEITLGENSRVLAGWINPPPP
VYMQYFFFNVTNPDEFSAGTAKPRVTQIGPYTYREYRPRENVTYLENGTKVFATNPKSFV
FLREMSVGDPEVDLLTTPNIPFIAVMNEMNSYSFLIRPLISLFIKSLGVNLFMTRTVHEF
LWGFKDPLMTKLHQLKPEVDENFGLMYKKNGTHEGEFVFHTGEQNYMDYGKIDTWNGIRQ
MNWWSSNQSNMINGTDGSVFHTFLSRDELLYIFAADLCRSIHLGYVTDTEVKGIPAFRFA
PPADVLAAPSENPANAGFCVPAEDCLSKGVLKVSVCREGAPIVVSFPHFYQADQQYIDAI
DGMNPNKEEHETYLDLNPTTGVPIRACKRAQLNIIMKRIPGFPQTRFLNETIFPIMYVNE
TATIDDDSASQMKTLLLIITIVSNFPVIIVGVGAILLLVFIFLVCRNRQRKNEVKRIDFT
EAFHSFATGKEDTAYTPVSNKSDESPESHSNQPAKNGSYIAMSPVEAQKC
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgaggagatcctgtgccatctacgcgaccggaattgtgtgtgctcatctactcatagtg
ggaatcgccctgatggtggctcaagttttccaaacaatgatccaggagaggataaaaaag
gagatcaccttgggtgagaacagtcgagtactggctggctggataaaccctccacctcca
gtttacatgcagtattttttcttcaatgttaccaaccctgatgagttctcagctggcaca
gcaaagcctcgtgtcacacaaataggaccttatacatacagggaatacagacccagagaa
aacgtcacatacttggaaaacggcacgaaggtttttgccacaaatccaaagtcttttgta
tttcttcgggaaatgtctgtcggagacccagaggtggacctcttgaccactcccaacatt
ccattcattgccgtcatgaatgaaatgaactcctattcttttttaatccgtcccctgatc
tccttatttataaaatccttgggcgtaaacttgttcatgacccgcacagtgcacgagttt
ctctggggtttcaaggatccactgatgactaaacttcaccagttgaagcctgaggtggac
gaaaactttggcctcatgtacaagaaaaatggaacccatgaaggtgaatttgtcttccac
actggagagcagaactacatggattatggcaagatcgacacctggaatggaataagacaa
atgaactggtggtcatcaaaccagagcaacatgattaatggcacagatggcagcgtgttc
cacaccttcctgtccagagacgagttgctctacatctttgctgcagatctctgcaggtca
atccatctgggatatgtgactgacacggaggtgaaggggattcctgcatttcgcttcgct
cctcccgctgatgtcctcgctgcaccatcggagaatcccgcaaacgctggcttctgcgtg
cctgctgaagactgcctgagtaaaggagtgcttaaagtcagcgtgtgccgtgaaggagcc
cctattgttgtttcattcccacatttctaccaagctgatcagcagtacatagatgccatt
gatgggatgaatccaaataaggaagagcacgaaacatatcttgacctaaatccgacgact
ggggttccaattcgtgcctgtaagagagcccagctcaatattataatgaagaggatacct
ggcttccctcaaacacggttcctgaacgaaaccattttccctattatgtatgtcaacgag
acggcaaccatcgatgatgactccgcctcccaaatgaaaactctgcttctcatcataaca
atagtgtccaactttcccgtcatcattgtcggcgtgggcgccatattactgctcgtcttc
atcttcttggtgtgcaggaaccgtcaaagaaagaatgaagtaaaacgtattgattttacc
gaagcttttcattcttttgctacggggaaggaagatacagcctacactccggtcagcaac
aaatcagacgagtcacccgaatctcacagcaaccagccagcaaagaatggctcctacatc
gccatgtcaccagtcgaggcccagaagtgttga
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