Clarias gariepinus (North African catfish): 128509249
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Entry
128509249 CDS
T10780
Symbol
abca2
Name
(RefSeq) ATP-binding cassette sub-family A member 2
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar02010
ABC transporters
cgar04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
128509249 (abca2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
128509249 (abca2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128509249 (abca2)
Transporters [BR:
cgar02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
128509249 (abca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
Motif
Other DBs
NCBI-GeneID:
128509249
NCBI-ProteinID:
XP_053336859
LinkDB
All DBs
Position
21:21935688..22022363
Genome browser
AA seq
2525 aa
AA seq
DB search
MAIQQKAGNFMRYSGTDDRSASDMGFLHQLHLLLWKNVSLKRRGPWVLAFEIFIPLVLFF
ILLGLRQKKPAIPVKEAFYSAAPLTSAGIIPIMQSLCPDGQRDEFGFLQYKNSTVTQLLE
RIGEVMEQDRLFASDGPTLGEELESLQHHLDSISSAQSPIESSFNTSHVFTLGSVIRNST
HFQQFLIRNLSLNNDTADLLLSSPVNLKEVYNLIFGTYPKASAGSGGWPEGHRGARSPGE
KVLQLEEQLLGGWRSLEGGLLHKALRDPTKAADKHALLQLLSQALGIAGGGGETNKFDPQ
ELQLMEGVLLTGGVLQVLTCGEGKDSELNRILSVPEKQQSVLRAYQTAVCGGDVGQKAER
FAQISQELRDQIDTQKIIEKLILEQSNASALPFQSHLGALLKELTEVEKLLKDVDLLSGL
AKLLPKGACAGHQTSSSANNATWNSNTTSWGTNTTENPAEGKDTPADNPHSQFSAFVQLW
AGLQPILCGNNRIIEPEALKQGNMSSLGFTSKEQRNLGLLVHLMTTNPKILYSPIGSQVD
KVIQKANETFAFVGNVTHYAKVWLNISAELRPFLEEGKLHNHLAWLQQLTSELRRHPELL
NTSDSELLESLMQENFTLPNISTLLEQLDTIDNAACGWIQFMSKVSVDIFKGFPDEESIV
NYTLNQAYHDNVSVFASVIFETNKDGSLPPHVQYKIRQNSSFTEKTNEIRRAYWRPGPNT
GGKFYFLYGFVWIQDMMERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPL
CMVISWVYSVAMMIQHIVAEKEHRLKEVMKMMGLNNAVHWVAWFITGIVQLSISVTALTA
ILKYGRVLLHSDPFIIWLFLTVYAIATIMFCFLVSVIYSKAKLASACGGIIYFLSYVPYM
YVAIREEVAHDKITAFEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWRTINQSPVEGDD
FNLLLSMVMLTIDAIVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRIETWEWPW
SSSARLSVMEEDQACAMEHRRSEETRGIEEEPSHLPLVVCIDKLTKVYKTGSKMALNKLS
LNLHENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTEMERIRQNLGMCPQ
HNVLFDKLTVEEHLWFYSRLKGMAEEDIQKEMDKMIEDLELSNKRHCLVQTLSGGMKRKL
SVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMDEADLLGDRI
AIISHGKLKCCGSPLFLKSTYGDGYKLTLVKKQSDSNPADQSSMPPSSSLSLCSETRVTQ
FIRQYVASCLLMSDSNTELSYILPSEAVRKGCFERLFQALEQSLDSLALTSFGVMDTTLE
EVFLKVSEEDLSLENSDADMKSSPGGASVGKSSSLLSSQQCDGTLPGDVTRPEVEMSNMV
MSSRLSSSQASLQSNSSVGSVRGDEGGPYSDFYGEYYPLFNNTQDLDSASLRDEEEEPSS
SEPHVLEGQGSFKLEGWWLRFRQFHGLIVKRFHCAKRNTKVLFSQILLPAFFVCVAMTVA
LSVPEIGDLPPLILSPSQYHNYTQPRGNFIPFANEDRLQYRSKLSPDASPQKIINTLRLP
SGVGATCVLKTPFNSTLDQLAQSLNPYANNAKTLAARYFDPMCLDSFTQGVPLSNFVPPP
PSPAPSDYPEPRFDDALWNYTAAPPTTAHEMVTSPPPLPLSIREPVRCICSMQGTGFTCP
SGVGGRPPLTKVVTGDILVDITGRNVSEYLLYTSDRMRLHRYGGITVGNIQKSVPASFGK
KGSLMARKIAVRRSAQVLYNNKGYHSMPTYLNVLNNAILRANLPLSKGNPAAYGITVTNH
PMNRTSASLSLDYLLQGTDVVIAIFIIVAMSFVPASFVVFLVAEKSTKAKHLQFVSGCDP
VIYWLANYIWDMLNYLVPATCCVLILFVFDLPAYTSPKNFPAVVALFLLYGWSITPIMYP
ASFWFEVPSTAYVFLIVINLFIGITATVATFLLQLFEHDKDLKLVNSYLKSAFLIFPNYN
LGHGLMEMAYNEYINEYYAKIGQFDKVKSPFEWDIVTRGLVAMTIEGFVGFLITILCQYN
FLRKAQRAPVNSQPIEDDDVDVARERRRVLRGDAVNDMLKIENLTKVYKSRKMGRILAVD
RLCLGVRPGECFGLLGVNGAGKTTTFKMLTGDESTTGGEAFIEGHSILKDLLRVQQSIGY
CPQFDALFEDLTAREHLELYTRLRGIPWKDEDRVVQWALEKLQLSKYADKPAGTYSGGNK
RKLSTAIALIGYPSLIFLDEPTTGMDPKARRFLWNLILDIIKTGRSVVLTSHSMEECEAL
CTRLGIMVNGRFKCLGSIQHLKNRFGDGYMITVRTKTTASVKEVIRFFNRNFPEAILKER
HHTKIQYQLKSENISLAQVFSKMEQVVEVLSIEDYSVSQTTLDNVFVNFAKKQSDNLEQQ
ENSPKKSSESPLQRLLRILLPRTANTELSALVSEEPEELESDDDEGLISFEEERVQLSFN
TDTLC
NT seq
7578 nt
NT seq
+upstream
nt +downstream
nt
atggcgattcagcagaaagcaggaaatttcatgcgttatagcggaaccgatgatcggtca
gcatcagacatgggtttccttcatcagcttcaccttctgctatggaaaaacgtctcatta
aagcgcagagggccgtgggtgctggcgtttgagatcttcatccctctggtccttttcttc
atcttgctgggtctgaggcagaaaaagccagccatccctgtcaaagaagctttctacagc
gccgcccccctgacctcggcgggcatcatacccatcatgcagtccttgtgtccggatggc
cagcgagacgagttcggcttcctgcagtacaaaaactcgaccgtgactcagttgttggag
cggatcggggaggtgatggagcaggatcgcttgttcgcctcggacgggccgactctcggg
gaggagctggagtcactgcagcaccacctggacagtatcagctcagcccagagtcccata
gagagcagcttcaacaccagccacgtcttcactttaggcagcgtcataaggaattccact
cacttccagcagttcctcatccgaaatctctctctgaacaacgacacggccgacctgctt
ctctcatcccctgtcaacctgaaagaggtgtacaacctcatttttggcacatatcccaaa
gcaagtgcaggaagtggaggctggcccgaaggtcaccgtggtgctcgcagccctggagag
aaggtcttacaactggaggagcagctgcttggaggttggaggagtctggaagggggtctg
ctgcacaaagcgctgcgagacccgactaaagcagctgataaacacgcccttctccagctg
ctttcccaggctctgggtattgctggaggtggaggggagacaaacaaatttgatccacag
gaactgcagttgatggagggagttttgctgaccggtggtgtcctgcaggtacttacatgt
ggggagggcaaggacagtgagctcaacaggatcctatcggtgcctgagaagcagcagtca
gtgttacgagcctatcagacggccgtgtgtggaggagatgtggggcagaaagcggagcgt
tttgcacagatcagccaggagctgagggatcagatcgacacacagaaaatcattgagaag
ttaatattggaacagtccaatgcttcagcgctgccatttcaatcccacctgggtgctctt
ctgaaggagctgactgaggtggagaagctgcttaaagatgtggacctgctctcaggcttg
gccaagttgctgcccaaaggggcatgtgcagggcaccagacttcttcttcagctaacaat
gccacttggaactctaacaccaccagctggggtaccaacaccactgaaaaccctgctgaa
ggaaaggacactccggcagataaccctcactctcagttctctgcttttgtgcagctgtgg
gctgggttgcagcccattctatgtggaaataacaggattattgagccagaagctttgaag
caaggcaacatgagctcgcttggctttaccagcaaagagcagcggaatttagggcttctc
gtccaccttatgactacaaatcccaagattctctactctcccataggttcacaggtggat
aaggtcattcagaaggccaatgagacatttgcctttgtgggcaatgtgactcattatgct
aaagtatggctcaacatttcagctgagctcagacctttcctggaggaaggcaaactgcac
aatcacctagcatggctgcaacagttgacctctgaactgcggaggcacccggagttgcta
aacacttcggatagtgagctgttagaaagtctgatgcaggagaatttcacgctgccgaac
atcagcactctgctggagcagctcgacaccatcgacaacgccgcctgcggctggattcag
ttcatgtcaaaggtgagtgtggatatattcaaaggcttcccggatgaagagagcatcgta
aactacactctgaaccaggcctaccatgataacgtctccgtatttgcgagcgtcattttc
gagaccaataaggacggctccctgcctcctcatgtacagtataagatcagacagaactcc
agcttcactgaaaaaacgaacgagatacgccgggcttactggcgccctggacccaacacc
ggcgggaagttctacttcctctatggcttcgtgtggatccaagacatgatggagagagca
atcattaatacatttgttggtcacgacgttgtggagcccggcaattacgtgcagatgttc
ccctacccctgctacaccagagacgattttctgtttgtgattgagcacatgatgcccctg
tgcatggtcatctcctgggtttattcagtggccatgatgatccaacacattgtggccgag
aaggagcatcgactcaaagaggtgatgaagatgatgggcttaaataatgctgtgcactgg
gtggcctggttcattactggcattgtgcagctctctatctcagtgacggccctgacggcc
atattaaaatacggccgagtgctcctccatagcgaccccttcatcatctggctcttcctc
actgtatacgccatcgccaccatcatgttctgttttctagtgtcagtgatctactccaaa
gccaaactggcctcagcttgtggtggaattatctatttcctgagttacgttccctacatg
tatgtggcgatccgagaagaggtggcccatgacaagatcacagccttcgagaagtgcatt
gcgtctctgatgtccaccaccgcttttggcctcggttcaaagtacttcgctttgtacgag
gtggccggtgtgggcatccagtggcgcaccatcaaccagtcaccggtagagggcgatgat
tttaacctcctcttgtccatggtcatgctgaccatcgacgccattgtgtacggcgtgctc
acttggtacatagaggctgtgcatccaggaatgtacgggctgccccgcccttggtacttc
cccctgcagaagtcctactggctaggcagtggacggattgagacctgggagtggccgtgg
agcagcagtgccaggctcagcgtgatggaggaggatcaggcctgcgccatggagcataga
cgctcagaggaaacccgtggaatagaagaggaacccagtcacttaccgctggtggtgtgc
atagacaaactcaccaaggtctacaagacgggcagcaagatggctctcaacaagctgagc
ttaaatctgcacgaaaaccaggttgtctccttcttgggacacaacggagctggcaagacc
accactatgtcaatccttaccgggctgttcccccccacctcgggctcagccactatatac
ggccacgatatccgcacggagatggagcgcatccggcagaacctgggcatgtgcccgcag
cacaatgtcctcttcgacaagctgactgtagaagagcacctgtggttttactcgcgcctg
aagggcatggctgaagaggacattcaaaaagagatggataagatgattgaggacctggag
ttgtctaataaacgccactgtctggtgcagacgctttcaggaggaatgaagaggaagctg
tcggtggctatagcctttgtgggcgggtcccgggccgtgattctggacgagcccacagcc
ggcgtggacccgtacgcacgtcgtgccatatgggacctcatcctcaaatacaagcaaggc
cggaccatcctcctctccacacaccacatggacgaggctgacctcctaggcgaccgcatc
gccattatctcccacgggaagctcaagtgctgcggctcacctctcttcctcaagagcacc
tacggagacggatataaactcacactagtgaaaaagcaaagtgactccaatcctgcagat
cagtcgagtatgcccccttcctcatccctgtccctgtgctcagagaccagagtcactcag
tttatccgacagtatgtagcctcctgcctgctgatgtctgactccaacaccgagctgtcc
tacatcctgccatctgaggctgtcaggaaaggctgcttcgaaagactgtttcaggctctg
gaacagagtttggatagtctggctctcaccagctttggagtgatggacaccacgctggag
gaggtctttttaaaagtgtcagaagaggacttgtcgcttgagaacagtgacgcagatatg
aagagctccccaggcggggcgtcagtagggaagtcttcctctcttttgtcctcgcagcag
tgtgatggaactctgcctggtgatgtgacccggcccgaagtggagatgagcaatatggtg
atgagctcgaggttaagctccagtcaggcctcgctgcagtcaaattcctccgtgggttct
gtgagaggtgacgagggaggaccgtactctgatttctacggtgaatattacccgctgttt
aacaatacccaggacctggactcagccagccttagagatgaggaagaggagccgagctcc
tcagagccgcatgtcctggagggtcagggcagcttcaagctggagggctggtggctacgc
tttcgccaatttcacggcctcattgtcaagaggttccactgtgccaagaggaacaccaag
gtcctgttctcgcagatccttctgcctgccttctttgtttgtgtggcgatgaccgtcgct
ctgtccgtgcctgagataggtgatctgcctcctctgatcctgtccccgtctcagtaccat
aactacacccagcccagaggaaacttcatccccttcgccaacgaggaccggctacagtac
aggagcaagctgtccccagacgccagccctcaaaagatcataaatacgctgcgcttgcca
tcaggcgtgggtgcaacctgcgtgctcaaaaccccctttaatagtacactggaccagctg
gcgcagagcctcaacccttatgccaacaatgccaagacacttgccgcacgctacttcgac
cccatgtgcctggactcgttcacccagggggtaccgctgtctaactttgtcccgcctcca
ccctctcctgcaccatcggattacccggagccacgctttgatgatgctttgtggaactat
acggcagctccgcccaccactgcccacgaaatggtgacgtctcctcctccacttccacta
tccatccgagagccggtgcgttgcatttgctccatgcagggaacgggtttcacgtgtccc
agcggcgtgggcggacgaccgcccctcacaaaagtggtcacgggagatattctagtggac
atcacgggccgcaacgtgtctgagtatcttctctatacctccgaccgcatgagactgcac
agatatggaggcatcactgttggaaacatccagaaatcagtcccagcatcctttggaaaa
aaggggtcgctcatggcgcgcaagatagcggtgcgccgatcggcccaggtgctgtataac
aataaaggctaccacagcatgcccacatacctgaacgtgctgaacaatgccatcctgcgt
gctaacctgccccttagcaagggcaaccctgcagcttacggtatcacagtgactaatcac
cccatgaacagaaccagtgccagtctttctctggattacctgctccaaggcaccgacgtg
gtcattgccatcttcatcatcgtagctatgtccttcgtcccagccagctttgtggtcttt
ctggtggctgagaagtccaccaaggccaagcacctgcagtttgtaagcggctgtgacccc
gtcatctactggcttgccaattacatttgggacatgctgaattacctggtcccagctaca
tgctgcgttctcatcctgtttgtgtttgacttgcctgcgtacacatcgcccaaaaatttc
ccagcagtggtggcactctttctgctgtatggctggtccataacccccatcatgtatcca
gcatcgttctggttcgaggttcccagcacagcctatgttttcctcatcgttattaacctc
tttataggaatcacagccactgtggccactttccttctccagctgtttgaacatgacaag
gacctaaagctggtgaacagctatctaaagtcagccttcctcatcttccctaactataac
ctgggtcacgggctaatggagatggcctacaacgaatacattaacgagtactatgccaag
ataggtcagtttgataaggtgaagtctccatttgagtgggacatcgtgacacgtggactg
gtggccatgaccattgagggatttgtcggctttcttatcaccatcctgtgccagtacaac
ttcctccgtaaagctcagagggcgcctgtgaacagtcagcctatcgaagacgacgacgtc
gatgtggcccgcgagagacggagagtgctcagaggagacgccgtaaacgatatgctaaag
atcgagaatctaactaaggtgtacaagtctcgtaagatggggcgcatcctggcggtggac
cgcttgtgtctgggcgtccggcctggagagtgtttcggcctcctgggggtcaacggtgca
ggaaagacgaccacttttaaaatgttgaccggagacgaaagcacgaccggaggagaggcg
tttatcgaaggacacagcatactgaaggatcttttgcgagtgcagcagagtatcggttac
tgtcctcagttcgacgctctgttcgaggacctgactgcacgagagcacctggagctgtac
acacgcctcaggggtataccgtggaaggacgaggaccgggtggtgcagtgggccttggag
aagctccagctctcgaaatacgcggacaagccggctggcacctacagcggcgggaacaag
cgcaagctgtccacggccatcgctctcatcggatacccgtcgctgattttcctggacgaa
cccacgaccggcatggacccgaaagctcgccgcttcctctggaaccttatcctcgacatc
atcaagacgggacgatcggtggtgctgacatcacacagcatggaggagtgtgaggcgttg
tgtacccgactgggaatcatggttaatggaaggtttaagtgcctggggagcatacagcat
ctcaagaacaggttcggggacgggtacatgatcacggtgcgcaccaagacgaccgctagt
gtgaaggaagtgatccgcttctttaacagaaacttcccagaggccatcttaaaggagaga
caccacactaagatccagtaccagctgaagtcagagaatatctccctggcccaggtgttc
agtaagatggagcaggtggtggaggtgctgagtatcgaggattactccgtcagccagacc
accctggataacgtttttgtgaactttgccaaaaagcaaagtgacaacctggagcagcag
gagaactcgccgaagaaaagcagcgagtcgcccctgcagcgtctcctgagaatcctgctg
ccgcggaccgccaacactgaactgagcgccctggttagcgaggagcctgaggagctggag
agtgatgatgatgaaggactcatcagttttgaggaagagagggtgcagttgtcctttaac
acagatactctttgctga
DBGET
integrated database retrieval system
