Clarias gariepinus (North African catfish): 128509333
Help
Entry
128509333 CDS
T10780
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03022
Basal transcription factors
cgar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128509333 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
128509333 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgar03021
]
128509333 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128509333 (gtf2h2)
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
128509333 (gtf2h2)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
128509333 (gtf2h2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Zn_ribbon_GTF2H2
Motif
Other DBs
NCBI-GeneID:
128509333
NCBI-ProteinID:
XP_053336999
LinkDB
All DBs
Position
21
Genome browser
AA seq
393 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEDILFEAKRKRVFESRGQVRLGMMRH
LFVVIDSSRTMEDQDLKPNRLTSTLKLMEYFVEEYFDQNPISQIGIITTKNKRAEKLTDL
AGNPKKHVTALKKAVDAGCVGEPSLYNALNMAMQTLKHMPGHTSREILVIFSSLTTCDPA
NIYELIKTLKSLKIRVSVIGLSAEVRVCTVLTRETGGSYSVILDESHFKELLTFHVKPPP
ASSSSECSLIRMGFPQHVIASASDQDAKPSFSMSHLESSDGGPGLSLGGYFCPQCRGKYT
ELPVECKVCGLTLVSAPHLARSFHHLFPLEAFQERPLEEHTGDRFCQACQGQLKDKSVFT
CPVCASVFCVECDIFIHDTLHCCPCCIQRQDTS
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggagccggagagagcgaagcgctgggagggaggatacgagcggacatgggag
gtgctgaaggaggacgagtccggctccctgaaagccaccgtagaggacattctcttcgag
gccaaacggaagagagtgttcgagagtcgtgggcaggttcgtctggggatgatgcgtcac
ctgttcgtggtgatcgactcgtctcgcaccatggaggaccaggacctgaagcccaacaga
ctcacatctacgctgaagctcatggagtactttgttgaagaatactttgaccagaacccc
atcagtcagatcggaatcatcaccaccaagaacaaacgagccgagaagctcactgacctc
gcaggaaatcctaagaaacacgtgacggccctgaagaaggcggtggacgcggggtgtgtg
ggcgagccgtctctctacaacgccctcaacatggccatgcagacgctcaaacacatgccg
ggacacaccagccgagagatcctggtcatcttcagcagtctgaccacctgcgatccagcc
aacatctacgagctcatcaagactctgaaatcccttaaaatccgagtgtctgtgatcgga
ctgtctgctgaggttcgggtgtgtaccgttctcaccagagaaacaggaggaagctacagt
gtgattctggacgagagccactttaaggagctgctgacgtttcacgtgaagcctccacct
gccagctcgtcctcagagtgctcgctcatccgcatgggtttccctcagcacgtcatcgct
tccgcgtctgatcaggacgccaaaccgtccttcagcatgtcgcacttggagagttcagac
ggaggaccaggactcagtctcggcggttacttctgtccccagtgcagaggcaaatacacc
gagctgcctgtcgagtgtaaagtgtgtggtctgacgctggtctccgcccctcacctggct
cggtcgtttcatcacctctttccccttgaagcgtttcaagagcgccccctggaggagcac
acaggagacaggttctgtcaggcctgtcaaggacagctgaaggacaaaagtgtgttcacg
tgtccggtgtgtgcgagtgttttctgtgtggagtgtgacatatttattcacgacacgctg
cactgttgtccatgctgtatacagagacaggacacgtcctga
DBGET
integrated database retrieval system
