Clarias gariepinus (North African catfish): 128509400
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Entry
128509400 CDS
T10780
Symbol
apba1a
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 1
KO
K04531
amyloid beta A4 precursor protein-binding family A member 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128509400 (apba1a)
Membrane trafficking [BR:
cgar04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
128509400 (apba1a)
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
128509400 (apba1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
PDZ_2
PRT6_C
Motif
Other DBs
NCBI-GeneID:
128509400
NCBI-ProteinID:
XP_053337102
LinkDB
All DBs
Position
21:15831226..15898502
Genome browser
AA seq
906 aa
AA seq
DB search
MSHQEVPLGCEPAEVTEADLGRREQPSSQRRRHENSGRSRHHHNGNGGENQSGSQRQRRH
EGSEGTGRPRSSRRTPEEGDMEQQQVLRPIPRPAVSRYRRQGDTEARLRAQQQRQRQRER
ERQQREAERAEQQRLEDEEDDHSALERSASTESGFHNHTDQAEGDAVMALEAEPEDEGMY
GVALRPEAEEYAESAESEQQPQYPPQPPPLPHEPLQNMERPTRLEAEALNPGYSNYVYAQ
PRAEDQPYSEPYADYEVQEHVYEEIPGATEGDTPQQRRAGLRLLERDSYGQQEAVGSRLH
HYDERSDGESDSPEKEAEFAPYPRTDSCEQDEDAEHVMDEGKESLRSRSLEHPAPEQGKD
RHKDDEQTDEGKDLEAGNEGGKGEDGRSTMSSPSEESAQVRSSRQKRDAISLAIKDIKEA
IEEVKSRTVRSPYTPDEPKEPIWVMRQDLSPSMESDLQPPLGGDSPGPAPTSPQGAESSS
SNLLQHEGSENFESPSPAGKESRRSIASFPTYVEVPGPCDPEDLIDGIIFAANYLGSTQL
LSDKTPSKNVRMMQAQEAVSRIKTAQKLAKNRKKAPEGETQPMTEVDLFISTQRIKVLNA
DSQETMMDHPLRTISYIADIGNIVVLMARRRMPRSDSQENVEASDPAQDEKRQYKMICHV
FESEDAQLIAQSIGQAFSVAYQEFLRANGINPEDLSQKEYSDLLNTQDMYNDDLIHFSKS
ENCKDVYIEKQKGEILGVVIVESGWGSILPTVIIANMMHAGPAEKSGRLNIGDQIMSING
TSLVGLPLSTCQSIIKGLKNQSRIKLNIVRCPPVTTVLIRRPDLRYQLGFSVQNGIICSL
MRGGIAERGGVRVGHRIIEINSQSVVATPHEKIVHILSNAVGEIHMKTMPAAMYRLLTAQ
EQPVYI
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgagccatcaggaggtgccgctgggctgtgagccagctgaggtgaccgaagccgacctg
ggtcgccgagagcagccctcctcccagcgcagacgacatgaaaactcaggccgatctcgc
catcatcacaacggtaatggcggtgaaaatcagtccgggtcacagaggcaacgccgtcac
gaaggctctgaaggaaccggacgaccacgcagctctcggaggacgcctgaggaaggcgat
atggaacagcagcaagttctgcggccgatcccacggccggcggtgagccgctaccgcagg
caaggagatacagaggctcggctgagggctcagcaacagcggcagaggcagagggagagg
gaaagacaacagagggaggcagaaagagcggagcaacagcgtctggaggacgaagaggat
gaccacagtgccctggaacgctctgccagtacagagagcggcttccacaatcacacagac
caggccgagggtgacgctgtcatggcgttggaggctgaacctgaggatgagggtatgtac
ggtgtggcactgcgaccagaggcggaagaatatgcagagagtgcggaatctgagcagcag
ccccagtaccctcctcaaccccctccacttccccacgaacccctgcaaaacatggagcgg
cccaccagactcgaggccgaggcacttaaccccggttactccaactatgtttacgcccag
cctcgtgctgaggatcagccctattccgagccctatgctgactatgaagtccaggagcat
gtctatgaggagattccaggagccactgaaggggacacgcctcagcagcgtcgtgcagga
ctccggctcctggaacgtgattcatacgggcagcaggaggctgtgggctccagactccat
cactatgatgagcgttcagatggtgaatccgacagtcctgagaaggaagctgaattcgcg
ccttacccacgcaccgacagctgtgagcaggatgaagatgctgagcatgtcatggatgaa
gggaaggagagtttgcgttcacgcagcctggagcaccctgcacctgaacagggaaaagac
agacacaaagacgacgagcagacagatgaaggaaaggatctggaggcagggaacgaggga
gggaaaggagaggatggcagatccaccatgagcagcccctctgaggagtcggctcaagtc
aggagcagcaggcagaagagggatgccatctctctggccatcaaggacatcaaggaggcc
attgaagaggtgaagagcaggacagtgcgctcaccgtacacgccagacgagcccaaagag
cccatctgggtgatgaggcaagacttgagccccagcatggagtcggacttacagccacca
ctagggggagattctccaggcccagctcccacctctccacagggggcggagtcttccagc
agcaacctgctgcagcatgaggggagtgaaaactttgagtctccgtctcccgctggcaaa
gagtcgaggaggagcattgcttcattcccaacatatgtggaagttccaggcccgtgtgac
ccagaggacctcatcgacggcatcatttttgccgcaaactacctggggtcgacgcagctt
ctgtcagacaagacaccatcgaagaacgtgcgcatgatgcaggctcaagaggccgtcagt
cgcatcaagacggcccagaaattagccaaaaacaggaagaaggcccccgagggcgagacg
cagcccatgacagaggtggatctcttcatttccactcaaagaatcaaagtactgaatgct
gactctcaggagaccatgatggaccacccattaagaaccatttcttacattgctgacatt
gggaacattgtggttctgatggccaggaggagaatgcctcgctctgactctcaggagaac
gtagaggcgtctgacccagcccaagacgaaaagcgccagtacaagatgatctgtcacgtg
tttgagtctgaagacgcccaactcatcgcacagtccattggccaggccttcagtgtagca
tatcaggaattcctgcgcgccaatggcatcaaccctgaggatctgagccagaaagagtac
agtgacctcctaaacacacaggacatgtacaacgatgacctcatacacttctctaagtca
gagaactgcaaagacgtttacatagagaagcagaaaggagagatcctaggagtggtgatt
gtagagtccggctggggctccatccttcctacagtcatcattgctaacatgatgcatgct
gggcctgcagagaaatccggaaggctgaatatcggggaccagatcatgtctattaatggc
accagtctggttggacttcctctctccacctgccagagcatcatcaaggggctgaaaaac
cagtcaaggatcaagctgaacattgtgagatgcccaccagtcaccaccgtactcatcaga
aggccagacctgagataccagttggggttcagcgtacagaatggcattatctgcagcctt
atgagaggggggatcgctgaacgaggtggtgttcgtgttggccaccgcatcattgagatc
aacagccagagcgtggttgcgacccctcatgagaagatcgtacacattctgtccaatgca
gttggcgagattcacatgaagactatgcctgctgccatgtaccgcctgttgacagcccag
gagcaaccagtttacatctaa
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