Clarias gariepinus (North African catfish): 128509439
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Entry
128509439 CDS
T10780
Symbol
pomt1
Name
(RefSeq) protein O-mannosyl-transferase 1
KO
K00728
dolichyl-phosphate-mannose-protein mannosyltransferase [EC:
2.4.1.109
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00514
Other types of O-glycan biosynthesis
cgar00515
Mannose type O-glycan biosynthesis
cgar01100
Metabolic pathways
Module
cgar_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
128509439 (pomt1)
00514 Other types of O-glycan biosynthesis
128509439 (pomt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cgar01003
]
128509439 (pomt1)
Enzymes [BR:
cgar01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.109 dolichyl-phosphate-mannose---protein mannosyltransferase
128509439 (pomt1)
Glycosyltransferases [BR:
cgar01003
]
O-Glycan biosynthesis
O-linked Man type
128509439 (pomt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_4TMC
MIR
Motif
Other DBs
NCBI-GeneID:
128509439
NCBI-ProteinID:
XP_053337154
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All DBs
Position
21:14958754..14967341
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AA seq
724 aa
AA seq
DB search
MFSTMHGVKLPITVKVDINVLLAAVTVSGLLTRLYGIQSPRAVVFDEVYYGQFVSLYMKR
VFFIDESGPPLGHMILALGGFLGGFDGNFIWNRIGAAYTSNVPIWTLRVIPALAGAFSVP
LAYLLMVELGYSHFSALGASLLLILENSLIVQSRFMLLEAVLIFFLLLAVVSYLRFHNSP
NSLSRWLWLVVSGASCTFAVGVKYMGLFTYFLLLSLAAFHAWRVIGDKTLSNGRVLLHVV
ARFLSLVVLPVFLYLGFFYIHLSLLYRSGPHDQLMSSAFQASLEGGLARITQGQPLEVAF
GSQVTLRSGSSKPVPCWLHSHKANYPIRYENGRGSSHQQQVTCYPFKDINNWWIIKDPRK
QSLVVSSPPRPVRHGDIVQLLHGMTSRFLNTHDVAAPMSPHSQEVSGYIDFNVSMPAQNL
WRVDITNRESDRDVWKTILSEVQLIHVNTSAVLKLSGVSLPEWGFHQLEVVGDKLYKGYQ
QSGVWNVEEHRYGRSQEQRERELELKSPTHVDFSRNLTFMAKFIELQWKMLTVRNEESEH
KYSSLPLEWITMDTNIAYWLHPSSNAQIHLMGNIVTWTFANLALIVYMVLFFTYLLRRRR
KIEDIPKDSWEQLVLAGVVCSGGWAVNYLPFFLMEKTLFLYHYLPAVTFQILQIPVVVEH
LYTHTLRSPAYKKAFGGVILAALCSVYICYRTFSPLTYGQSELSSEQLDALRWRDTWDIL
VHKR
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcaccatgcacggtgttaaactaccaataacggtgaaagtggacatcaatgtg
ctcctggctgcagtcacagtctctggactcctgaccagactgtacgggatccagtctccc
agagctgtcgtctttgatgaggtttactatggacagtttgtgtctctgtacatgaaaagg
gtgttttttattgatgagagtggaccacctcttggacacatgatcctggcactaggaggt
tttctcgggggatttgatggcaattttatctggaacagaattggagcagcatacaccagt
aatgttccgatatggaccctgcgtgtgatccctgctttggctggggcattttccgttccc
ctcgcctacctcctgatggtggagctgggatattctcatttctctgcactcggagcttcg
ttgctactcattctggagaactccctgattgtgcagtctcgcttcatgctcctggaggca
gtgctgatctttttcctgctgcttgctgttgtgtcttacctgcgtttccacaattcgcca
aacagtttaagcaggtggttatggctcgttgtctctggagccagctgtacatttgcagtg
ggagtgaagtacatgggtctttttacctacttcctgctactcagtctggcagcgtttcac
gcctggcgtgtcattggagataaaaccttaagcaatgggagagtgttgctgcatgtggtg
gctcgcttcctgtccctagtggtgctcccagtcttcctgtatttgggatttttctacata
catctgtctttactctaccgcagcgggccacatgaccagctgatgagcagcgcttttcag
gccagtctagagggtggcctggccagaattacacagggtcagcctctggaggtggcgttc
ggttcccaagtcactctccgtagtggttccagcaaacctgttccatgctggcttcattct
cacaaggccaactatccaatcagatatgaaaacgggcgcggcagctcgcaccagcagcag
gtgacatgctaccctttcaaagatatcaacaactggtggattatcaaagatccaagaaaa
cagagccttgtggtaagcagtccacccagacccgtcagacatggcgatattgtacagctg
ctgcatggcatgacctcacgttttctcaacacgcatgatgttgcagctcccatgagccct
cactcccaggaagtgtctggctacatcgatttcaatgtgtccatgccagctcagaacctc
tggagagtggacattacaaaccgtgagtctgaccgagacgtgtggaagactattctgtca
gaagtgcagctgatccacgtcaacacctcagcagtgctaaagctgagtggagtgtctctt
ccagagtgggggtttcaccagctcgaggtggtgggtgataagctctataaaggctaccag
cagagtggtgtgtggaatgttgaagaacatcgctatggtagaagtcaggaacagcgggag
agagagcttgaactcaagtccccaactcatgtcgacttcagcagaaacctcacatttatg
gccaagtttattgaactgcagtggaagatgctgactgtaagaaatgaagagtcagaacac
aaatacagctccttacccctggaatggattaccatggataccaatattgcatactggctt
catccatcaagtaacgcccaaatccacttgatgggaaacatcgtcacctggacctttgca
aacctcgcacttattgtttacatggtcctgtttttcacttatctcctgagacgccggagg
aaaatagaggatatccctaaagattcttgggagcagctggtgctggcgggtgttgtgtgc
tctggaggatgggctgttaattacctgcccttcttcctgatggagaagaccctgtttcta
taccactatcttccagctgtcactttccaaattctgcagatccctgttgttgtggagcat
ctgtacactcacacactgagatctcccgcgtacaagaaggcgtttggtggagtgatcctg
gcagctttgtgctcggtgtacatttgttatcgcaccttcagccctctcacgtatggccag
tctgagctctcctcagagcagctggacgcactgcgatggagagacacctgggatatactg
gtccataagcgctga
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