KEGG   Clarias gariepinus (North African catfish): 128509499
Entry
128509499         CDS       T10780                                 
Symbol
rnft2
Name
(RefSeq) RING finger and transmembrane domain-containing protein 2 isoform X1
  KO
K28516  E3 ubiquitin-protein ligase RNFT2
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cgar04121]
    128509499 (rnft2)
Ubiquitin system [BR:cgar04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    128509499 (rnft2)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 zf-RING_5 zf-rbx1 zf-C3HC4_4 zf-RING_6 zf-RING_16 Prok-RING_4
Other DBs
NCBI-GeneID: 128509499
NCBI-ProteinID: XP_053337237
LinkDB
Position
21:24528530..24546309
AA seq 452 aa
MQRRHSSNTDGMPAERNRSQTLGSESSLDEGGVFDCLKPESPTSPQQLFSGLVGVSASAV
TSAPFQAAGLVLGSPPEVFIQMTTSSRDDACHRAENAAFLPRPAQHHHHHHHHHFHQSGQ
HRSALLHSASSRDERQGSRDDGGEKGIRITGDEASAPAPALSELKAVVTWLQRGFPFILI
LLIKVCFQHKLGIAVCIGMASTFAFANSTLKHQVSLREERSIFVALWILVFLAGNIVYVY
YTFSAEELHNSLIFAKPNINSYDFFNLIWVVGITDFVLKYFTMAVKCLVLFLPKILLAFK
SRGKLYLLIEEFSQLFRALVPIQMWYKYIMGEEPSSSYFLGAALIIIYSLCKSFDLCGRI
SGIRKAFAVFCSSQSYGMRASTQQCNEAGDVCAICQAEFREPIALLCQHVFCEDCLCLWF
DRERTCPLCRAVVVETPRSWKDGTTSAHFQIY
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgcagagacgccacagtagtaacacagatggcatgccagctgaaaggaacaggagtcaa
actctgggatctgagagcagcctggacgaaggaggtgtgttcgactgtttaaagcctgag
tctccgacctcaccccagcagctcttctcaggcctggtgggcgtgtccgccagtgccgtg
acctccgcccctttccaggctgccggactcgtcctcgggtctcctcccgaagtcttcatc
cagatgacgacctcgtcgcgcgatgatgcctgtcaccgggctgagaatgcggcgtttctt
ccacgccctgcccagcaccaccaccatcaccaccaccatcacttccaccagtcggggcag
caccgctccgccctgcttcattcggcatcctcgagagacgagagacagggcagcagggac
gacggaggtgagaaggggatccgcattacaggagatgaagcgtctgcaccggctcccgct
ctgtccgagctaaaagctgtggtcacgtggctgcagaggggatttcctttcatcctcatt
ctccttattaaagtctgtttccagcacaagctcggtatcgctgtgtgtattggcatggct
agcacgttcgcctttgctaattcgaccctaaagcaccaggtctcgctgcgggaggagagg
tccatctttgtggctctttggattctggtgttcctggcgggcaacatagtgtatgtgtat
tacactttcagtgctgaggagctgcacaacagtttgatatttgcaaagccaaacatcaac
agttacgatttcttcaacctgatctgggtggtcggaatcaccgactttgtgctcaagtac
ttcaccatggctgtcaagtgcctcgttctcttcttacccaaaatccttctggctttcaaa
tccagaggaaagctctatctgcttatcgaggagtttagtcagctctttcgcgctctggtg
cccatccagatgtggtacaagtacatcatgggcgaggaaccatccagcagctacttcctg
ggtgcagcgttgattattatatacagcctgtgcaagtcatttgacctgtgtggaagaata
tcagggattcgaaaagccttcgccgtgttctgtagctcgcagagttacggtatgagagcc
agcacacagcagtgcaatgaggcgggagatgtgtgtgcaatctgccaagctgagtttaga
gagccaatcgctctgctctgtcagcatgtgttctgtgaagactgtctgtgtctgtggttc
gaccgggaacggacgtgtccgctgtgccgtgccgtcgtcgtggaaacaccgcgcagctgg
aaggatggcaccacgtctgcccattttcagatctactga

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