Clarias gariepinus (North African catfish): 128509545
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Entry
128509545 CDS
T10780
Symbol
yars2
Name
(RefSeq) tyrosine--tRNA ligase, mitochondrial
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
128509545 (yars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cgar01007
]
128509545 (yars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgar03016
]
128509545 (yars2)
03029 Mitochondrial biogenesis [BR:
cgar03029
]
128509545 (yars2)
Enzymes [BR:
cgar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
128509545 (yars2)
Amino acid related enzymes [BR:
cgar01007
]
Aminoacyl-tRNA synthetase
Class I (A)
128509545 (yars2)
Transfer RNA biogenesis [BR:
cgar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
128509545 (yars2)
Prokaryotic type
128509545 (yars2)
Mitochondrial biogenesis [BR:
cgar03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
128509545 (yars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
SYY_C-terminal
S4
Motif
Other DBs
NCBI-GeneID:
128509545
NCBI-ProteinID:
XP_053337298
LinkDB
All DBs
Position
2:29780193..29786836
Genome browser
AA seq
505 aa
AA seq
DB search
MKVGQRGFYPIGGSSESVTQHVTENMAASCGRNLCGGWRGKTGFILKSSFAVCFPKATFR
TSAVGRTGFLSSLHERGLLKESFPENAAQVDLPQLLHSAQQTVYCGFDPTADSLHAGHLL
PLIGLLHFRDAGHHVVALIGGATARIGDPSGKSRERESLSAAAAHSNGRSVLEGLQQIFT
NHELYFCSDPQRLGTVRVLNNASWYRDWNVVEFLSETGRHFRMGTLLSRHSVQSRLKSPE
GMSLSEFSYQLFQAFDFYYLNQVHGCRIQLGGTDQLGNLMSGHEFIHKKTGEEVYGLTVP
LLTTSMGDKLGKTAGNAVWLNRNKTSPFEFYQYFLRLPDNNVEQYLKLFTFLPLAEVEKV
MEQQRQDPGKRTAHKRLAAEVTKLVHGKEGLESAKRCTNALYNSSIEALQQMDDAELKEL
FREAPFKEFFLEPGTTVLDACRRSQAIPEGPRGYQMISDGGVWMNHQRVSNPEQVLVPGQ
HILSNGLSLIRVGKKNFYIIKWLSM
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtaggtcaacgaggtttttatccaatagggggcagcagtgagagcgtcactcag
cacgtcactgagaacatggcggcgtcctgtggccgcaacctgtgcggaggatggcgaggg
aaaacgggtttcattctaaaaagctcgtttgcggtttgctttccgaaggctacctttcgc
acttcggcggtcggaagaaccggatttctgtcatcgctgcacgaacgaggactcttgaag
gagtctttccctgaaaacgcggctcaggtggatctgccccagctgctgcattcggcccag
cagaccgtgtactgcggcttcgacccgaccgccgacagcctgcacgcgggtcacctgctg
ccgctcatcgggctgctgcacttccgcgacgccgggcatcacgtggtcgcgctgatcggc
ggagccacggcgcggatcggcgacccgagcggcaaatccagggagagagagagcctgtcg
gccgccgcggcacacagtaacggccgctccgtgctggaaggcttacagcagatcttcacc
aaccacgagctgtatttctgtagcgacccgcagagactgggcaccgtgcgcgtgctgaac
aacgccagctggtaccgggactggaacgtggtggagtttctgtccgagacgggacgccac
ttccgcatgggcactctgctcagcagacacagcgtgcagtcccgcttaaaaagtcccgag
ggcatgagtctcagcgagttctcctaccagctcttccaggccttcgacttctattacctg
aaccaggtgcacggctgcaggatccagctggggggaacagatcaactcgggaatctgatg
tccggccacgagttcattcacaagaaaacaggagaggaagtatatggacttacagttcct
ctgttgaccacctcaatgggcgataagctgggaaagacggcaggaaacgctgtctggctg
aaccggaataaaacctctccctttgagttctaccagtatttcctcagacttccagacaac
aatgtggagcagtacctgaagcttttcaccttcctcccattggctgaggtggagaaggtg
atggagcagcagcggcaggatccgggcaagagaacagcacacaaacgtcttgctgctgaa
gtaaccaaactggtgcatggcaaggaggggctggaaagtgccaaaagatgcaccaacgct
ctgtacaacagcagcattgaggctctgcagcagatggatgatgcagaactaaaggagttg
ttcagagaagctccatttaaggagttctttctggaaccaggtaccacagtactggacgcc
tgccgtcggagccaggccattcctgagggaccaagagggtatcagatgataagtgatggc
ggtgtgtggatgaaccaccaaagggtctctaaccctgagcaggtactggtccctggtcag
cacatcctctcaaatggactaagtctaatccgagttggcaaaaaaaacttttacatcatt
aagtggctgagcatgtga
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