Clarias gariepinus (North African catfish): 128509587
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Entry
128509587 CDS
T10780
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03030
DNA replication
cgar03410
Base excision repair
cgar03420
Nucleotide excision repair
cgar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
128509587 (rfc5)
03410 Base excision repair
128509587 (rfc5)
03420 Nucleotide excision repair
128509587 (rfc5)
03430 Mismatch repair
128509587 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgar03032
]
128509587 (rfc5)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128509587 (rfc5)
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128509587 (rfc5)
DNA replication proteins [BR:
cgar03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
128509587 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
128509587 (rfc5)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
128509587 (rfc5)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
128509587 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
128509587 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_22
AAA_24
AAA_14
RuvB_N
ResIII
AAA_16
AAA_assoc_2
DEAD
DUF815
TIP49
PhoH
AAA_7
ATPase_2
AAA_19
AAA_5
AAA_30
TniB
nSTAND3
AAA_2
DNAX_ATPase_lid
Mg_chelatase
Thioredoxin_6
FKRP_N
Motif
Other DBs
NCBI-GeneID:
128509587
NCBI-ProteinID:
XP_053337345
LinkDB
All DBs
Position
21:complement(24239703..24248648)
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AA seq
334 aa
AA seq
DB search
MASTSKPPLQTRNLPWVEKYRPQKLDDLISHQDILSTIQKFIKEDRLPHLLFYGPPGTGK
TSTILACAKQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDE
ADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSQTQMIPRL
EHVIQQESINITPDGMKAIVTLSTGDMRRSLNILQSTHMAYGKVTEETVYTCTGHPLRSD
IANILDWALNKDFTTAYNQILQLKTLKGLALHDILTELHLLIHRVDFPPAIRMGLLIKLA
DIEYRLASGTSEKIQLSSMVAAFQAVRDMVVNDG
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacaagcaagccacctcttcagacaaggaatttaccatgggttgaaaagtac
agaccacagaagctggacgatttgatctcgcatcaggacattctgagtacgattcagaag
ttcatcaaagaagaccgactgccacacctgctgttttacggacctccgggaacaggaaag
acctccaccattttagcctgtgctaaacagctctacaaggacaaagagttcaactccatg
gttctggagctcaatgcgtcagacgaccggggtatagatgtggtccgaggcccgatcctc
agctttgccagcaccaggaccattttcaagaagggtttcaagttggtgattctggatgag
gcggatgccatgacccaggacgctcagaacgctttaaggagagtgattgagaagttcacg
gagaacactcggttctgtctgatctgtaactacctgtctaaaatcatccccgcgctgcag
tctcgatgcacacgcttccgcttcggccccctgtcccagacccagatgatcccccgactc
gagcacgtcatccagcaggagagcatcaacatcactccagacggcatgaaggctatcgtg
acgctgtctacaggagacatgaggcgatcgttgaacattctacagagcacccacatggcc
tatgggaaggtgacggaggagacggtgtacacatgcacgggtcatcctcttcgctcagac
atcgccaacatcctggactgggccttgaacaaagacttcaccacggcgtataaccaaatc
ctccagctgaaaacgctaaaaggtttagcgctgcatgatatcctgaccgagctacatctt
ctcatacacagagtggatttccctccggcgatccggatgggtttgctgatcaagcttgcc
gacattgagtatcgcctggcctctggaaccagtgagaagattcagctgagctctatggtg
gctgctttccaggcggttagagatatggtggtcaatgacggctag
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integrated database retrieval system
