Clarias gariepinus (North African catfish): 128509631
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Entry
128509631 CDS
T10780
Symbol
prdm12b
Name
(RefSeq) PR domain zinc finger protein 12b
KO
K24255
PR domain zinc finger protein 12 [EC:2.1.1.-]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128509631 (prdm12b)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
128509631 (prdm12b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
zf-met
zf-C2H2_2
zf-C2H2_jaz
zf-C2H2_15
zf-C2H2_7th_ZNF462
zf-C2H2_6
CBM_3
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
128509631
NCBI-ProteinID:
XP_053337418
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All DBs
Position
21:complement(13055320..13059138)
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AA seq
369 aa
AA seq
DB search
MGSVLPAEALALKAGFKPHTLALSDIITSDILHSFLYGRWRNALGEHLFEEKSSAAGPRT
AFTAEVLAQSFSGEVQKLSSLVLPSEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRV
IAPEHVDLFKNNNLMWEVFNEDGTVRYFIDASQEDHRSWMTYIKCARNEQEQNLEVVQIG
SSIFYKAVETIPPDQELLVWYGNSHNTFLGIPGVPGIDEEHQKKHKNDDFHVCDTSSSAA
SLVTAGRMRCVICHRGFNSRSNLRSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLHTG
ERPYKCHVCQSAYSQLAGLRAHQKSARHRPPSSGSVVGLQTPSPPPPPPQMAAVPHPASL
VHHIPTMVL
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgggttccgtgttgcccgctgaagccctggccctaaaggctggatttaagccacacaca
ctggctctctcagacatcatcacctcagatatcctgcacagtttcctgtacggccgctgg
aggaacgcgctgggagagcatctgtttgaggagaagagcagcgccgcgggtccaagaacg
gccttcaccgccgaggtgctggcgcagtccttctcaggagaggtgcagaagctgtcaagc
cttgtgttacccagtgaggtgatcatcgcacagagctcaattcccggtgaaggtcttggc
atcttctccaagacgtggatcaaggcaggcactgagatgggacccttcactggcagggtt
attgcacctgaacatgtagacctcttcaaaaacaacaacctcatgtgggaggttttcaat
gaggacgggacagtgcgctacttcattgacgccagtcaagaggatcatcgcagctggatg
acctacatcaaatgcgcacggaatgaacaagagcagaacctagaagtggtgcaaattgga
agcagcatattctacaaagcagtagagacaatcccaccagatcaggagctgttggtgtgg
tatggaaattcccacaatacatttttgggtattcctggggttcctggcatagacgaagag
catcagaaaaagcataaaaacgatgattttcacgtgtgcgacacctcgtcctccgcagca
tctctggtcacggcgggccgcatgcgctgcgtgatttgtcaccgcggcttcaattcacgc
agcaatctgcgctcacacatgcgcatccacacactcgacaagcccttcgtctgtcgcttc
tgcaaccgccggttcagtcagtcatccacgctgcgcaaccacgtgcgcctgcacactggc
gagcgcccctacaagtgtcacgtgtgccagagcgcctattcacagctggcaggtctgcgt
gcgcaccagaaaagcgcgaggcatcgtccacccagttccgggtccgtggtggggctccag
accccctcacctcctcctcctccacctcagatggcagcggtgcctcacccggcctcgctg
gtgcaccacatacccaccatggtgctatga
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