Clarias gariepinus (North African catfish): 128509651
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Entry
128509651 CDS
T10780
Symbol
acsl1b
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1b
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00061
Fatty acid biosynthesis
cgar00071
Fatty acid degradation
cgar01100
Metabolic pathways
cgar01212
Fatty acid metabolism
cgar03320
PPAR signaling pathway
cgar04146
Peroxisome
cgar04216
Ferroptosis
cgar04920
Adipocytokine signaling pathway
Module
cgar_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
128509651 (acsl1b)
00071 Fatty acid degradation
128509651 (acsl1b)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
128509651 (acsl1b)
09143 Cell growth and death
04216 Ferroptosis
128509651 (acsl1b)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128509651 (acsl1b)
03320 PPAR signaling pathway
128509651 (acsl1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgar01004
]
128509651 (acsl1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128509651 (acsl1b)
Enzymes [BR:
cgar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
128509651 (acsl1b)
Lipid biosynthesis proteins [BR:
cgar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
128509651 (acsl1b)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of breast milk
128509651 (acsl1b)
Exosomal proteins of breast cancer cells
128509651 (acsl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
128509651
NCBI-ProteinID:
XP_053337448
LinkDB
All DBs
Position
2:13660302..13678877
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AA seq
697 aa
AA seq
DB search
MQAQELLKQLRVPELAEMRDYLRSLSTGTLVGMGAFAALTTYWYTTRPKALKPLCDLRMQ
SVEVPGGEFARRSVLVDADKLLSFYYDDATTMYEVFTRGLRVSNNGPCLGSRKPKQPYEW
LSYSEVAERAENLGSALLHKGHSKVKDQYIGIFAQNRPEWTISELACYTYSLVSVPLYDT
LGTEAIDYIIEKTGITTVVCDLPAKARLLLDCVAARQHSLKTMILMEDFDSELVAQAQKC
GVELISLKDAEALGKAHRQQPAPPKADDIAIICFTSGTTGNPKGAMLTHRNILSNVSAFT
KITETSCPLSPSDSHISYLPLAHMFERVVQGVMLIHGGRIGFFKGDIRCLMDDLITLKPT
VFPVVPRLLNRMIDKIYGQANTPLKKWILEFAFRRKEAEMMSGVMRRNSLWDKIIFKKVQ
ASVGGKVRMMLTGAAPVSAPVLTFLRAALGCQFYEGYGQTECTAGCAVTLSGDWTAGHVG
PPLPCNLVKLVDVADMNYLAVNGEGEVCVKGPNVFKGYLKDPEKTEEAIDKDGWLHTGDI
GRWQPNGTLKIVDRKKHIFKLAQGEYIAPEKIENIYIRSEAVAQAFVHGDSLQACLVAII
VPDPDYLPGWAKKKGFHGSYEELCRSTEVKNAILEGIVKLGKESGLKSFEQVKDIVLHTE
MFSIQNGLLTPTLKAKRAELRNHFRQQIDQLYSKIHM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcccaggagctgttgaagcagctgcgtgtgcctgagctggcagagatgagggat
tacctccgcagcttgtccaccggtacgctcgtgggcatgggagccttcgctgcactcacc
acctactggtacacaactcgaccaaaagcgctcaaaccactgtgtgacctgcgcatgcag
tccgttgaggtgccgggaggagagttcgcccggcgctcagtgttagtggacgccgacaag
ctcctgtctttttactacgatgatgctacaaccatgtacgaggtcttcaccagaggccta
cgggtatcgaataacggaccttgtttaggctccagaaagccaaagcagccgtatgagtgg
ctgtcctattcagaggttgcggagagagccgagaacctgggctcagcgctgctacacaaa
ggtcactccaaagtcaaagaccagtacatcggcatcttcgcccagaacagacccgagtgg
accatctcagagctggcttgctacacatactcactggtgtcagtgcctctgtacgacaca
ctggggaccgaagccatcgactacatcatcgaaaaaaccggcatcaccacagtggtgtgt
gacttaccggcaaaggctcgtcttctgcttgactgcgtggctgccagacagcactcgctg
aaaaccatgatcctgatggaggactttgactcggagttggtggcccaggcacagaaatgc
ggcgtggagttaatcagcctgaaagatgcagaggcgcttgggaaagcccatcggcagcag
cctgcacctcctaaggctgatgacattgctattatttgcttcactagtggaacgacagga
aaccccaaaggggcgatgctcacccatagaaacattttgtccaacgtttctgcatttacc
aagataacagagaccagctgtcctttaagccccagtgactctcacatctcgtacttacct
cttgcgcacatgtttgagcgagtggtgcagggggtgatgctgatccacgggggtcgcatc
ggctttttcaaaggagatatccgctgtctcatggatgacctcatcaccctgaagcccacc
gtgtttcccgtagtgcctcgtctgctcaaccgaatgatcgataagatctacggccaggcc
aacacccctctgaagaagtggatcttggaattcgccttcaggaggaaagaggctgagatg
atgagtggtgttatgaggagaaacagtctgtgggataaaatcatctttaagaaagttcag
gccagcgttggaggcaaagtgcgcatgatgctgactggtgccgctcctgtgtccgctcct
gtactgacgttcctgcgtgcagctctgggatgccagttttatgaaggctacggccagacc
gagtgcacagctggctgcgcggtcacgttatcaggagactggacagcaggtcacgtcgga
cctcctctgccatgtaaccttgtgaagctggtggatgttgctgatatgaattatctggcg
gtgaatggggaaggagaggtgtgtgtgaaagggcccaatgtgtttaagggatatctaaaa
gacccagagaagaccgaggaggccatcgacaaggacggctggctccacacaggagacatt
ggcaggtggcagccgaatggcactctgaagatagtggaccgtaagaagcacatctttaag
ctggcacagggagagtacatagccccggagaagatcgagaacatttacatccggagtgaa
gccgtggctcaggcttttgttcatggagacagcctgcaggcctgcctggtggccatcatt
gtgcctgacccggattacctgcctggctgggctaagaagaagggatttcacggctcctat
gaggaactctgcaggagcacggaagtgaaaaatgccatattggagggcattgttaaactg
ggcaaggaaagtggactgaagtctttcgaacaggtgaaggatatcgttttgcacacagag
atgttctcgatccagaacggcctcctgaccccaacacttaaagccaagcgcgccgagctc
cggaaccatttcagacagcagatcgatcagctttactccaagatccacatgtga
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