Clarias gariepinus (North African catfish): 128509682
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Entry
128509682 CDS
T10780
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
128509682 (snapc4)
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
128509682 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128509682
NCBI-ProteinID:
XP_053337482
LinkDB
All DBs
Position
21:complement(14996045..15007691)
Genome browser
AA seq
1608 aa
AA seq
DB search
MASEDLLAQRNKLQHQILALEQTLGNDQNIVDLLSSDNDSAEESDDSGHAQDNVAHENLE
AERQQIQKEIEELERTLGADAALVDALTDSEHGSVIDSGGEKSDDDLDLPQDLETCLQMN
LVYQEVLKEKLADLEKLLKENREQQKDLEEQLSGPSYVNPGLPHLKLFLGSFMKPYFKDK
LTGLGPPANEETKERLTNGTKPCDEKTIRRWEPWQKTLLINSVVTDTMKRMLQPKLSKME
YLTAKMAKAKEPEKEELQNQITLLEKDIERIRSLKEDQLYGDRNGDHDWDKIANIDFEGF
RQPDDLMRFWQNYLHPSINKSTWNQEEIAKLAEVAEKHNYCHWDQIAESLGTNRTAFMCF
QTYQRYISKCFRKRAWTKEEDQVFRDLVDKMRIGSFIPYTQISYFMEGRDSSQLIYRWTC
VLDPSIKKGPWTKEEDQLLLKAVKKYGCKEWWKIRLEVPGRTDNACRDRYLDCLRDDIKR
GAWSDEEVELLKQLVEKHGVGKWAKIASEIPNRVDSQCLNKWKWMMQLANRKGKRKRRRR
KTSASGAPQLKRRRLRRKKVSKEEFGTESDTSEDEKEQVPYMDDVVEEEAVVEENVSVDE
DCRLEYVQPDMKEWIPARRNNLGHSFGNLKTTWVRLPTEAEGCDSGSVHITVLDKLGNAV
KTYVGMEPPALQKWNSSNEHAMIMVSECDIKSMLISMKASVIKARTPKTKTSSSSCTNQN
SAETNEEVDKSKMESGQRKRQKPITKAVATKQLNYDLMLAITPWVGNVVMPLSFRERQVC
EADVVRNRAADVPLLVSPVFLFFLQALKVDVDGCKKVIEARKNKVSMTPGPESRPDSVKK
PTTGSRRRGNTVADLLAKRTEQRKRYRSLQSPVFVDSLLFPQTAKIAIPRRPQPQKKTKQ
VMQPVNQKQNAAVIPQTFATSHNVTQGILPLLQLSDTSKNYPPVVLLAMPVNSGGATESA
SCPTTSASTTKPPTETVENVSAPKRKHKPTIKAQALMENKRDKLSKKKQLEKNKSRAAAK
QQKGSVPQTVTVLPQTTAWIVTPAGLMPVAGIQVQAPGISGPQNNLQMVFQPPVIVNPST
SVTLDDGLKLSNPAPDIPGNNIISQTSGSNRGENSRPSSVSDNTNVSSFPSSSNFPSVNS
GAVAKKPGVLQALSGTNMPTSITGSVAQVTSFETACHENKPVTTTNPMSSLVRDSSSSVG
ASQNLTESCISDTTDSIPKVYAATSTCVPSAHPLNISVSGTVSGPQSQHHVSEVQPIIVN
QNGSLAPINPSGACLINNAPLTPTANFTRVLTNSTSPNISVAEPCLIKNATPTSTANVPP
PNSTITKIDMTVPPYSTNSPATSSSYLIIPTSASPSVLNAIPPSSIVNSSVPISVGGHPT
DQLCVNPAITPMNTNCQFPPQTMVQQMTSQAKKQPVQGEVTTPNPTPKPITFDPSLMFLE
PPSQVNNWRRGMGGIILPNLKDKIPYLPPFVSSINTLTTLLKGRDSLLMSAVQLLPEEHR
DSSDDEAKIAAVRKIVSERFKTNQAYLLMKARFLSCFTLPALLATINPNKESTDDLDQED
DMDKVEPKLFGDEAQPLGSLLNVEEGELTATQFPGVEPRNDNHISATI
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atggcatcagaagacctgctggctcagagaaacaaactccagcatcagattctggctctg
gagcaaactctgggcaatgaccaaaacattgtagacctcctgtcttcagacaacgacagt
gctgaggagtctgatgacagtggacacgcacaggacaatgttgcacacgagaacctggaa
gcagaacgacagcaaatacagaaggagatagaagagttggagagaacccttggtgcagac
gcagctctggtggatgccctgacagacagcgaacatggcagtgtaatagattctggtggt
gagaagagtgatgacgatttggatcttcctcaagatttggaaacctgtcttcagatgaat
ttggtttatcaggaagtgctgaaagaaaaactagctgacttggagaagcttcttaaagaa
aaccgggaacagcagaaagatcttgaggagcagctctctggtccttcatacgtcaatcct
ggcctccctcatcttaaactgttccttggcagctttatgaaaccgtatttcaaagacaag
ctgactggtttgggacctccagccaatgaagaaactaaggagaggttgactaacgggacg
aagccatgtgacgaaaaaacaataaggagatgggagccatggcaaaaaacattgcttatc
aactccgtagttacagacacgatgaaacgcatgctgcagcccaaactctcaaagatggag
tacttaactgcaaagatggctaaagcaaaagagcctgagaaagaagaactacaaaaccaa
attactctcttggagaaagacatagaacgaataaggtcattgaaggaagatcagctgtat
ggggatcgcaatggtgatcatgattgggacaaaatagcgaatattgattttgagggcttc
cggcaacctgatgatttgatgagattctggcagaattacttgcatccctccattaacaaa
tcaacctggaatcaggaagagattgcgaagctggcagaagttgcagaaaagcataattac
tgccactgggaccaaatagcagaatcacttgggaccaataggacagcgttcatgtgcttc
cagacatatcagcgctacatctctaaatgttttagaaagagagcatggactaaagaggag
gaccaggtgttcagagatcttgtggacaagatgaggatcggcagcttcataccatatact
caaatatcatactttatggaaggacgtgatagttcccagctcatctaccgttggacgtgt
gttctggatccttccataaagaagggaccttggacaaaagaggaagaccagttactgctg
aaggctgtaaagaagtatggctgcaaggagtggtggaaaattcgcttagaagtccctggg
aggacagacaacgcatgtcgagatagatatctggattgccttcgagatgatataaagaga
ggtgcctggagcgatgaagaagtggaactgctgaaacaactggtagaaaaacatggtgtt
ggaaaatgggctaagattgcctctgaaattccaaaccgcgttgacagccagtgtttaaac
aagtggaaatggatgatgcagcttgctaatagaaaaggtaaaaggaaaagaagaaggagg
aagacatcagcaagtggtgcgccgcagttgaagaggaggcgtttgcgtcggaaaaaggtc
agcaaagaagagtttgggactgaaagcgacacctccgaagatgaaaaggaacaagtgccg
tacatggacgatgtcgttgaagaggaagcagtagtagaagaaaatgtctcggtagatgag
gactgtagattagagtacgtccagccagatatgaaggagtggattccagcacggaggaac
aatctgggacattcttttggaaatctgaaaaccacatgggtaagattgccaactgaggca
gaagggtgtgacagcggttctgtacacatcactgtgctggacaaattggggaacgctgtt
aagacttacgtcggtatggagccacctgctttgcaaaaatggaactcaagcaatgagcat
gccatgatcatggtgtctgaatgtgacattaaaagcatgctgattagcatgaaagcatct
gtcattaaagcgaggacaccaaaaaccaaaacaagctcatcttcatgtacaaatcagaac
agtgccgaaaccaacgaggaggtggataagagtaaaatggaaagcggtcagagaaaaagg
cagaaacctattaccaaagctgtagccaccaaacaactgaactatgatctcatgttagcc
atcactccatgggttggcaatgtggtaatgcctttatctttcagagagaggcaggtttgt
gaagcggacgttgttcgaaatagagcagcagatgttccgcttttagtatcaccagtgttt
ttgttttttctgcaggccctaaaagttgatgttgatggctgcaagaaagttattgaagcc
cgcaaaaacaaagtgtccatgacaccaggacctgaatcaagaccggattcagtcaagaag
cccactacaggttcccgtcgccgtggtaacaccgtagcggacttacttgccaaaagaacg
gagcaaaggaaacgttataggtcccttcagtcccctgtgtttgtcgactctttgttgttt
ccgcagacagccaaaattgcaattcctcgaaggcctcagccacaaaagaaaacaaaacag
gtcatgcaacctgttaatcagaagcaaaatgctgctgtgataccccagacttttgccact
tcacataatgtgacacagggaattttacctcttctacagttaagtgatacatcaaaaaat
tatccacctgtagtcctcctagcaatgccagtaaattctgggggtgccacagagtcagca
tcatgtcccacaacctcagcgtccacaactaaaccacctacagagacagtagagaatgtg
agcgccccaaaacgcaagcacaaacccacaataaaagctcaagcgttgatggaaaataaa
agagacaagctctccaagaaaaagcagctggaaaaaaacaaaagccgagcagctgcaaaa
caacaaaagggaagtgtaccccagacagtgactgtactaccacaaactacagcctggatt
gtcactcctgctggtttaatgcctgttgctggaattcaggtgcaagcccctggcatctct
ggtccccaaaacaatcttcagatggtatttcaaccacctgtcatagtcaacccgagtact
tctgttacacttgatgatggcttgaaactaagcaatccagcaccggatatacccggaaat
aatattatatctcagacttctggatcgaatcgtggtgaaaactctagaccttcctctgtc
tcggataacactaacgtctcctcatttccctcttcttctaacttccccagtgtcaattct
ggtgctgtcgcaaagaaacctggtgttcttcaagctctatctggcacaaatatgccaaca
tctattacaggatctgtagcccaagttacttcttttgaaactgcatgtcatgaaaacaaa
cctgtgactaccacgaaccccatgtcctctctggttcgtgattcatcctccagtgtggga
gctagtcaaaaccttacagaatcgtgtatttcagatacaaccgacagcattcccaaagtt
tatgctgccacaagcacatgtgttccttctgcccatcccttgaacatttctgtttctggt
actgtttcaggtcctcaaagccaacatcatgtttctgaagttcaaccaatcatagtaaac
caaaatggctctttggcccccataaacccttcaggagcctgcctaattaataatgcacct
ttgactcctactgcaaattttactagggttttaactaactctacgtcacctaatatcagt
gttgcagaaccctgcttaattaaaaatgccacgccaacttctactgcaaatgtacctcca
cctaactctaccataactaaaatcgatatgactgtaccaccatattctacaaacagccct
gctacatcttcatcttatttaataatccccacttctgcatccccctctgtgttaaatgca
attccaccatccagtattgtgaacagttctgttccaatcagtgtaggtggccatccaaca
gatcagttgtgtgttaatccagctatcactcctatgaacactaattgtcaatttccgcct
cagactatggtgcagcagatgacgtcccaagccaaaaagcaacctgttcagggagaagtt
accacacctaatcccacaccaaaaccaattacttttgatcctagcttgatgttccttgag
ccaccaagccaagtcaataattggagaagggggatgggtggaattatactgcctaatctg
aaagacaaaataccttatcttcccccatttgttagcagtatcaatacactgaccaccttg
cttaaaggacgagattctttgttgatgtcagcagtacagctcctacccgaagaacacaga
gattccagtgacgatgaagccaagatagctgctgtccgtaagatagtgtctgagaggttt
aaaaccaaccaagcatatttgcttatgaaggctcgcttcttgtcatgctttaccttgcct
gccctcttggccactatcaatcccaacaaagagtcgactgatgatctggatcaggaagat
gatatggacaaagtcgagcccaaactatttggagatgaagctcaaccactggggtctctg
ctcaacgtggaagaaggtgaattaacagcaacacagtttcctggggttgaaccaaggaat
gacaatcatataagtgctacaatataa
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integrated database retrieval system
