Clarias gariepinus (North African catfish): 128509812
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Entry
128509812 CDS
T10780
Symbol
sv2ca
Name
(RefSeq) synaptic vesicle glycoprotein 2Ca
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128509812 (sv2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgar02000
]
128509812 (sv2ca)
Transporters [BR:
cgar02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
128509812 (sv2ca)
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Paralog
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
LD_SV2
Pentapeptide_3
Pentapeptide_4
Motif
Other DBs
NCBI-GeneID:
128509812
NCBI-ProteinID:
XP_053337633
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Position
21:complement(18226011..18255151)
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AA seq
729 aa
AA seq
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MDDTDLKDHMSLMKGAKDMVREAKRQASKKVNTVVDRSSDEYSHSRAYHHFQNEDVEYYD
PPQGNYTGNSANDEEGSSDATEGHDEDDEIYEGEYQGIPSESGHRDGHVALGQPVADGLK
DRKELESERQADEEELAQQYELIIQECGHGKFQWQLYFTLGLALMSDGVEVFVVGFVLPS
AETDMCMPDSSSGWLGSIVYLGMMLGAFFWGGMSDKLGRRQCLLICMSINGFFAFQSSFV
QGYGFFLFCRMIAGFGIGGAVPIVFSYYAEVLAREKRGEHLSWLCMFWMIGEIYASAMAW
AIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCSVVALTFMPESPRFYLEVGKHDEAWM
ILKQIHDTNMRARGQPEKVFTVNRIKIPKQIDEFVEMHPETSNLVSKVIFRVKTELYGIW
LNLMKCFNYPMKDNTIKLAIVWFTLSFGYYGLSVWFPDVIKHLQADEYASRTKAHLNEQI
ENFTFNFTFENQIHFNSVFINDRFYKMEFKSVTFINTTFQDCYFEDVTSVATFFHNCTII
DCVFFNSGIDDSELINTAVINSSFFHNKTGCQITFDHDYSAYWVYFVNFLGTLAVLPGNI
VSALLMDKTGRLSMLGFSMILSGISCFFLWFGTSEAMMIGMLCLYNGLSISAWNSLDVVT
VELYPTVRRGTGFGFCNALCKLAAVLGNLIFGSLVSITKGIPILLASSVLVCGGLVGLRL
PDTRSNVLM
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggatgacacagaccttaaggaccacatgtctcttatgaaaggggctaaagatatggtc
agggaggccaaacggcaagctagcaagaaggtcaacacggtggttgacagatcgtcagat
gaatactcacacagccgtgcctatcaccatttccagaatgaagatgtcgaatactacgat
ccccctcagggcaactacacaggcaattctgccaatgatgaagaaggttccagtgatgcc
actgaaggccatgatgaagatgatgagatctatgagggtgaataccaaggaattccatct
gaatctgggcacagggatggacatgtggctttggggcagcctgtagcggatggtcttaag
gaccgtaaggagcttgaaagtgagaggcaagcagatgaggaggagctggcgcagcagtac
gagctaatcatccaggagtgcggccacggcaagttccagtggcagctgtacttcacactt
gggttagcactcatgtcagatggtgtggaggttttcgtagtcggctttgtgctgcccagt
gctgaaacggatatgtgtatgccagattcaagctctggttggctaggtagcattgtatac
ctggggatgatgctgggggctttcttctggggtggcatgtcggataaattgggccggcga
cagtgtctgcttatctgcatgtccatcaatggcttctttgcctttcagtcatcctttgtt
caaggctatggcttcttcctgttctgtcgcatgatagcaggttttgggattggtggggcg
gtgcctattgtgttttcatactatgcagaagtcttagcaagggagaaacgtggcgagcac
ctgagttggctctgcatgttttggatgattggggagatctacgcttctgccatggcctgg
gctatcatacctcattatggatggagcttcagcatgggttcagcgtatcagttccacagc
tggagagtatttgtagtggtgtgtgctctgccatgtgtctgctctgtggtggctctcacc
ttcatgccagaaagtccaagattctacctagaggtggggaagcatgacgaggcctggatg
atcctcaagcagatccatgacaccaacatgagagcacgtggacaaccagaaaaagtcttc
actgtaaatagaattaaaatcccaaagcagattgatgagtttgtggagatgcacccagag
accagtaatctagtgtctaaagttattttccgagtgaagacggaactttacgggatctgg
ttgaacctcatgaagtgtttcaattatccaatgaaagataacaccataaagctggctatt
gtatggttcactctgtcattcgggtactatggcttgtccgtttggtttcctgatgtgatc
aagcaccttcaggctgatgaatatgcttctagaacgaaggcccacctaaatgagcaaatc
gagaactttactttcaactttacattcgaaaaccagatacactttaatagtgtcttcatc
aatgacagattctataaaatggaatttaagtcagtaacttttatcaacaccacatttcaa
gactgctattttgaggatgtgacatctgtggcaacattctttcataactgcaccattatt
gattgtgtctttttcaattcaggtattgatgattccgaacttataaacacagcagtcata
aacagctcgttttttcacaacaaaacgggttgtcagataacattcgatcatgactacagc
gcctactgggtctactttgtcaacttcctcgggacgctggctgtgctacctggaaacatt
gtgtctgcactgctcatggacaaaacaggacgcctttccatgctgggattctccatgatc
ctttctgggatcagctgcttctttttgtggtttggcaccagtgaggccatgatgattgga
atgctgtgtctttacaacggcctcagtatctctgcctggaactcactggacgtggtcaca
gtagagttatatcctactgtcaggagagggactggctttggcttctgtaacgccttgtgt
aagctggcagcggtgctggggaacctgatctttggctctctggtcagtattactaaaggc
atcccaattctgctggcatcctctgtgctggtgtgtggtggtctggtgggactccggctc
ccagacacaagatccaatgtcctgatgtag
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