Clarias gariepinus (North African catfish): 128509813
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Entry
128509813 CDS
T10780
Name
(RefSeq) long-chain-fatty-acid--CoA ligase ACSBG2-like isoform X1
KO
K15013
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00061
Fatty acid biosynthesis
cgar00071
Fatty acid degradation
cgar01100
Metabolic pathways
cgar01212
Fatty acid metabolism
cgar03320
PPAR signaling pathway
cgar04920
Adipocytokine signaling pathway
Module
cgar_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
128509813
00071 Fatty acid degradation
128509813
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
128509813
03320 PPAR signaling pathway
128509813
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgar01004
]
128509813
Enzymes [BR:
cgar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
128509813
Lipid biosynthesis proteins [BR:
cgar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
128509813
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
128509813
NCBI-ProteinID:
XP_053337634
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Position
21:complement(16025055..16034952)
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AA seq
775 aa
AA seq
DB search
MMSVSGSNLRNTLGNNPESTIKETQAHQDNSAQPNGSCMTSITENNVMVTMANKVAEINL
SDASGIDSPIGNMNAEISERLKTETLSDKILESKEATAKSFEETAADVSVGGACKAADDE
AIPFTAKVYLAPAEQYWSTIRDRPVKLRMNKSGPGSEPPLTVHQMFQLTVDKFGDHPALC
LKKDGAWVTLTYKEYQQQCRAAAKSFLKLGLERFHGVGILGFNAPEWFIADIGCIMAGGL
AAGIYTTNSPEACYYVAHDCEANVLVVENEKQLEKILQVKDQLPHLKAIVQYKGEVKNKM
PNIYTWTEFMKIGEDISDAHLDAVINSQKANECCTLIYTSGTTGNPKGVMLSHDNITWTA
NAAGTLINLKKAEESLVSYLPLSHVAAQVNDMWVPMSFAGTTYFAQPDALKGSLATTLRE
VRPTSFLGVPRVWEKMQEAMKNIGAKSSLMSRKISEWAKGIGLQASYNAMNNNPSVPWGF
TLANNLVFKRVRTGLGLDRCKTCFTGAAPITKDTLEYFMSLNIPIYELYGMSESTGPHTM
SWTDNFRIMSCGKVIPGCKTELDKPDEDGNGEVCFWGRHVFMGYMNMADKTEEALGSDGW
LHSGDLGKHDMSDFLYITGRIKELIITAGGENIPPVPIEDAVKEELPIISNVMLVGDKKK
FLSMLLTLKCNVDDNGDPTDELAPLAVEFCRKHGVMASKVSEIISNKEPAIYKVIQEGVD
KVNAKATSNAQKVQKWALLSHDFSVSGGELGPTMKLKRPVVSKMYKEEIDYFYNV
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcagtcagtggttccaaccttcgaaacaccttgggaaataatccggaaagcact
ataaaagaaactcaggcacaccaagacaacagtgcacaacccaacggcagctgcatgact
tctataaccgaaaacaatgttatggtgacaatggctaacaaggtggcagaaatcaattta
tcggatgcttctgggattgacagtccaatcggaaacatgaatgctgagatttcagagcgg
ctaaaaacagaaacactgtctgataaaatcctggaatctaaagaggcaactgcaaagagt
tttgaggaaactgcagctgatgtttctgtaggaggagcctgtaaggccgcagatgatgaa
gcaatcccattcacagctaaagtgtacttggctccagctgagcagtattggagtacgata
agggacaggccagtgaagctaaggatgaataagtcgggtccaggctctgagcctcctctt
actgtccaccaaatgttccagttgacggtggacaagttcggggatcacccagccctctgc
ttaaagaaggatggagcttgggttacactgacctataaggaataccaacagcaatgccga
gctgcagccaagagcttcctcaagttggggctggagcgcttccatggtgttggtattctg
ggattcaatgctcctgagtggtttatcgcagacatcggttgcatcatggcaggaggcctt
gctgctggaatctacaccaccaactctccagaagcctgttattatgtggctcatgactgt
gaagccaatgtgttggtggttgaaaatgaaaaacaactagaaaaaatcctccaggttaaa
gatcaactaccacacctgaaggccattgttcaatacaagggagaagtgaaaaataagatg
ccaaacatatacacgtggacagagtttatgaagattggggaggacatatctgatgctcac
ctggatgcggtaattaacagccagaaagctaatgaatgttgcaccctcatttacacatca
ggaaccacaggaaaccctaaaggggttatgctcagtcatgacaatatcacatggactgca
aatgcagcagggactttaatcaatctgaaaaaagcggaggagtcactagtgagttacctg
cccctcagtcatgtggctgcccaagtgaacgacatgtgggtcccaatgagttttgcaggc
accacttattttgctcaaccagatgcattgaaaggttctttagccaccactttaagagaa
gtacgccccacaagcttcttgggtgttccccgtgtgtgggagaagatgcaggaagcaatg
aaaaacattggtgctaagtcttccctcatgtcaaggaaaatttcagagtgggctaaggga
atagggcttcaggccagctacaatgcaatgaacaataatccctcagtgccttggggcttc
acgctggctaataacctggtcttcaagagggtacgtacaggtcttggtttggatcgctgc
aaaacctgctttacaggggcagcaccaatcactaaggacacactggaatacttcatgagt
ctaaacatccccatctatgagctgtatggcatgagtgagagtacaggacctcacaccatg
tcttggactgacaacttccgtataatgagctgtggtaaagtgataccaggctgcaaaaca
gagctagacaagccagacgaagatggcaatggagaggtgtgtttctggggccgtcatgtc
ttcatgggctacatgaatatggctgataaaactgaagaggcactgggctcagacggctgg
ctgcattcaggagacctgggaaagcatgacatgagtgacttcctatacattacgggcagg
ataaaagagctaatcatcactgctggaggagaaaacatcccgccagtccctattgaggat
gcagtcaaggaggaactgcccatcattagcaatgtcatgctggtgggagacaaaaagaaa
ttcctctccatgcttcttactctcaagtgtaatgttgatgacaatggagaccccacagat
gagctggccccacttgctgtagagttctgcagaaaacatggtgtcatggcaagcaaagtt
tcagagatcatcagcaacaaagagccagccatttacaaagtcatccaggaaggcgtagac
aaggtcaatgccaaggccacatccaatgctcaaaaggtccagaagtgggcacttttatct
catgacttctctgtatctggaggggagcttggtcctacaatgaagcttaaaaggccagtg
gtttccaaaatgtacaaagaagaaattgattatttttataatgtataa
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