Clarias gariepinus (North African catfish): 128509837
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Entry
128509837 CDS
T10780
Symbol
cpeb1a
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 1a isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04114
Oocyte meiosis
cgar04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
128509837 (cpeb1a)
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
128509837 (cpeb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128509837 (cpeb1a)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128509837 (cpeb1a)
Factors involved in mRNA localization
Trans-acting binding proteins
128509837 (cpeb1a)
mRNA cycle factors
P-body specific factors
128509837 (cpeb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CEBP1_N
RRM_7
CEBP_ZZ
RRM_1
ANCHR-like_BBOX
VWC
Motif
Other DBs
NCBI-GeneID:
128509837
NCBI-ProteinID:
XP_053337667
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All DBs
Position
2:complement(32364704..32375462)
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AA seq
543 aa
AA seq
DB search
MSLSQREMSAWGKVVHMQREYHLASPEACGDTEAVMSSLLMKTWSWSTNTDLPEAECSAV
ASGLPFCAQEEQESRLGLLSVAELSLGLQSLSQSCWEQPWDYTECKLPARPSSPENLLGL
WPSPFSSALDTLQGFQRQDPLGGGDLLEYFPDLTRITESLSLLNSGSSSPVDSETSGISS
GSDHLTSLQISPLMKFHLFDTQKEALLPSLEQREDPISPLAPTLPAVLEESLAKCWTRKS
PWPSWSSQNAPEQTFSIEMKAQLHRQAAATNEATCTWAGQLPPRIYKNPIYSCKVFLGGV
PWDVTESSLLNTFSVFGPLKVDWPDKDGKHSQCPPQGYVYLVFDLEKSVKALLQACSHHH
LHPTDHLEYYYKISSKKIRCKVVQVIPWVITDSSFVCSPLLRFFPSRTVFVGALHGMLTA
EALAHIMTELFGEVVYAGLDTDKHKYPIGSGRVTFRNQKNYLKALTAAFVEIKTTKFSKK
IQIDPYLDDSMCQICNCQPGPFFCRDQTCFRYYCRSCWHWRHSADTLSTHRPLMRNQKSL
NPN
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtctttatcccagagggagatgtcggcctgggggaaagttgttcatatgcaaagagaa
tatcatttagcttctccagaggcctgcggagacacggaggcggtgatgagtagcctgctg
atgaagacctggagctggagcaccaacactgatctgccagaagcagaatgctcggcggtg
gccagcgggttgccgttctgcgcccaggaggagcaggagtctcgtctcggcctgctaagc
gtcgctgagctcagtttgggcctgcagtcgcttagtcagtcctgctgggagcagccctgg
gactacactgaatgtaaacttccagccaggcccagctctcctgaaaacttgttggggctc
tggccgagtcctttcagcagtgctctggacactctgcagggttttcagagacaagatcct
ttgggtggaggtgaccttttggaatattttcccgacctgactcgtattacggagtccctt
tcgctgctaaactcaggatctagcagtcctgtcgactctgagaccagcgggatctcgtct
ggatctgatcacctgaccagtttacagatctcaccgcttatgaaattccacctgtttgac
actcagaaagaggctttgttgcctagcctagagcagcgagaagaccccatctctcctctc
gctcccaccctccctgctgtacttgaagagtcgctggctaaatgctggaccagaaaatcc
ccctggcctagctggagctcgcaaaatgcaccagagcagacgttcagcattgaaatgaag
gctcagctgcacagacaggccgcagcaacaaatgaagccacttgtacctgggctggacag
ctgcctccacgcatctacaaaaaccccatctactcctgtaaagtgttcctgggaggagtg
ccatgggacgtcacagagagtagtcttctgaacacatttagtgtgtttggacctctaaaa
gtggattggcctgataaggatggtaaacactctcaatgtccacctcaaggttatgtgtac
ctagtttttgatttggagaaatcagtgaaggctttgctgcaggcctgcagccaccatcac
ctgcatcccacagatcacctggagtactactacaagatttctagcaagaagatacgctgt
aaggtggtgcaggtgatcccatgggtgatcacagacagtagctttgtgtgttccccctta
ctgcggttcttccccagtagaacagtgtttgttggggctctgcatggcatgctgacggct
gaagctttagctcacatcatgacggaactcttcggggaggttgtgtatgccgggcttgac
acagacaagcacaaatatccaatagggtctggacgtgtgacattcaggaaccagaagaat
tacctaaaagcactgactgctgcatttgtggaaatcaaaactactaaattctccaagaag
attcagattgatccataccttgatgactccatgtgccaaatttgtaattgccagccaggc
ccattcttctgtagagatcagacttgctttcggtactactgccgctcctgttggcactgg
cgccactcagcagacacgctgagtactcaccggccactgatgcgcaaccagaagagcctc
aacccaaactaa
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