Clarias gariepinus (North African catfish): 128510027
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Entry
128510027 CDS
T10780
Symbol
her9
Name
(RefSeq) hairy-related 9 isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03460
Fanconi anemia pathway
cgar04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
128510027 (her9)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
128510027 (her9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128510027 (her9)
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128510027 (her9)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
128510027 (her9)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
128510027 (her9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
128510027
NCBI-ProteinID:
XP_053337942
LinkDB
All DBs
Position
22:10117060..10118831
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AA seq
285 aa
AA seq
DB search
MPADTMEKQTASPIAGAPANGTHTPDKPKNASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAAMSTDTAVLSKYRAGFSECMNE
VTRFLSTCEGVNTEVRSRLLNHLSGCLGQMMALNYPPAAPAQHPHLAQPLNVQLPSSAVS
SKLSQSDAVPSKVFGGFQLVPATDGQFAFLIPNPTFASATTPVIPLYANAGVPVAVSASP
VHASSAPPAMSPVQGMTSFAGVSQAVSPVGVSAGPESSEPVWRPW
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgatactatggagaaacagacagcgtctccgattgctggtgctcctgcaaac
ggaacacacaccccggacaaaccaaagaatgctagtgagcatcgaaagtcttcaaagcca
atcatggagaagcgccgcagagcaagaatcaacgaaagcctaggccaactcaagaccctc
attcttgatgctcttaaaaaagatagttcgagacactctaaattggagaaagctgatatt
ctcgagatgacagtgaagcacttgaggaatttgcagcgagttcagatgactgcagccatg
tcaactgataccgcggtcttgagcaaataccgcgcaggattcagcgagtgcatgaacgag
gtgacgcgatttttgtccacgtgcgaaggcgtcaacacggaggtgcgctcgcggcttctg
aaccacctgtccggatgtttgggacagatgatggccttgaattatccgccagctgcacca
gcacagcatcctcacctagcgcagcctctgaacgtacagcttccctcctcggcagtgagc
tccaaactaagccagtcagacgcggtcccgtctaaagtgttcggcggattccagcttgtg
ccagccactgacggacagttcgcttttctcatccctaacccaacgtttgcctccgctacg
accccggtcatccctctctacgctaacgccggagttccggttgctgtcagcgcgagccct
gtgcacgcgagctcggccccgccagcgatgtcccctgtgcagggcatgacctcgttcgcg
ggcgtgtcgcaagccgtgagtccggttggtgtgagcgcggggccggagagcagcgagccg
gtgtggcggccctggtag
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