Clarias gariepinus (North African catfish): 128510035
Help
Entry
128510035 CDS
T10780
Symbol
srm
Name
(RefSeq) spermidine synthase
KO
K00797
spermidine synthase [EC:
2.5.1.16
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00270
Cysteine and methionine metabolism
cgar00330
Arginine and proline metabolism
cgar00480
Glutathione metabolism
cgar01100
Metabolic pathways
Module
cgar_M00034
Methionine salvage pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
128510035 (srm)
00330 Arginine and proline metabolism
128510035 (srm)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
128510035 (srm)
Enzymes [BR:
cgar01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.16 spermidine synthase
128510035 (srm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spermine_synth
Spermine_synt_N
Methyltransf_31
Methyltransf_25
DREV
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
128510035
NCBI-ProteinID:
XP_053337956
LinkDB
All DBs
Position
22:complement(6218742..6226744)
Genome browser
AA seq
289 aa
AA seq
DB search
MDNIKEGWFTETCTLWPGQAMSLQVEEVLYQKKSKFQDVMVFKSKTYGNVLVLDGVIQCT
ERDEFSYQEMIANLPLCSHPCPKKVLIIGGGDGGVLREVVKHPMVESVVQCEIDEDVINV
SKKYLPGMAKGFFSPKLTLNVGDGFEFMKKNQDAFDIIITDSSDPVGPAESLFKESYYQL
MKTALREGGILCCQGECQWLHLELIKEMRTFCKSLFPVVDYAYCTIPTYPSGQIGFMLCS
KNPDTDFREPARELARDEIESMDLKYYNPEIHRASFILPEFARKVLSEV
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggataatattaaagaaggctggttcactgagacgtgcacgttatggcctggtcaagcc
atgagtctccaggtggaggaggttctgtatcagaagaaatccaaatttcaggatgtgatg
gtgtttaaaagtaagacctacggtaacgtcctggtgttggatggcgtgatccagtgtacg
gagcgagacgaattttcctaccaagaaatgatcgccaacctcccgctgtgcagccaccct
tgccctaagaaggttctgattatcggcggaggagacggcggggtgctcagggaagtcgtg
aagcatccgatggtggagtctgtagtccagtgtgagatcgatgaggatgtcattaacgtt
tcgaagaagtacctcccgggaatggcgaagggatttttcagccccaagctgactctgaat
gtaggagatggtttcgagttcatgaagaagaatcaggacgctttcgacatcatcattacc
gattcctcagaccctgtcggtccagcggaaagcctgttcaaggaatcttactaccagctc
atgaaaacggcgctgcgcgagggtggaatactttgctgtcaaggagagtgtcagtggctt
cacttggagctcatcaaagaaatgcgcaccttctgcaagtcactcttccctgtagtggac
tacgcttactgcaccatccccacgtaccccagcggccagatcggcttcatgctctgcagt
aaaaacccggacacggatttccgtgagccggcacgggagttggcgagagatgagatcgag
agcatggacctcaaatattataaccctgaaatccaccgagcttcttttattctacctgaa
tttgccagaaaggtcctaagtgaagtgtaa
DBGET
integrated database retrieval system
