Clarias gariepinus (North African catfish): 128510077
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Entry
128510077 CDS
T10780
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128510077 (tfip11)
Spliceosome [BR:
cgar03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
128510077 (tfip11)
Other components
Complex C specific factors
128510077 (tfip11)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
128510077
NCBI-ProteinID:
XP_053338042
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Position
22:13536351..13544887
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AA seq
838 aa
AA seq
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MSMSHLYGRRGGDEDEDGVEIEKFEISEWDLANEFNPDRRRHRQTKEEATYGVWAEHDSD
DERPSFGGKRAKDYTAPVNFVSGGLRKTAAEEKREQDGSDDSDEDGEAPPPPPPPRAAAP
RKLQTGGNFKTSQKIFAGNIRPGQDIGSWEKHTRGIGQKLLQKMGYVPGKGLGKNAQGIV
NPIEAKVRKGKGAVGAYGNERTQQSIQDFPVVDSEEEEEMEFQRELGQWRKEPGAVKKKP
KYSFKTVEELKAHGKISNKSMSQPAGELAQVKVIDMTGREQKVYYSYSQMSQKHSIPEEA
PMTASAREQKTSSFTLPELEHNLKLLIELTEQDILQSSRRLQHERDTVVSLRHESTTLQT
RLSEESEAVERLEQVLEMVERLETAGEGGSLPLSLEECVQVFQQMQTHFYNEYKSMGLAD
LAVSAVHPLLNEKLRNWDPLKDCSYGFEEVGQWRAILENTQLQHSVPDTNHMDPYHRLIW
EVWVPVLRNCVAKWQPRNVGPMVDLVDCWAPVLPLWILDYVLEQLIFPRLQKEVDNWNPL
TDTVPIHSWIHPWLPQMQMRLEPLYSPIRNKLANALQRWHPSDTSARLILQPWKDVFTPG
AWEAFMVKNIVPKLALCLGELVVNPHQQLIDPFNWVMDWEGMLSLSSMVGLLEKHFFNKW
LQVLCSWLSNNPNYEEITKWYLGWKGMLSEQLLSHPLIKEKLNEALDIMNRAVASGIGGY
MQPGAKENIAYLTQTERRKDFQYEPPAPPQREIESSIPRLPVSGPVSAAVPTNFKDLIQA
KAEENGIVFMPIVGKRHMGKQLYTFGRIIIYVERGVVFVQGKKTWVPTSLQSLIDMAK
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccatctgtatgggagaaggggaggagacgaggatgaggatggagtcgaa
atcgagaagttcgagatttctgaatgggacttggccaacgagtttaatccagaccgacgt
cgccacagacagaccaaagaggaggcgacatatggtgtgtgggctgaacacgattcagat
gatgagagaccaagctttggaggcaagagagcaaaagattacacagctcctgtgaacttt
gtaagtggtggtttgaggaagactgcggctgaggagaaaagggagcaggatggctcagat
gactctgatgaggatggagaagcaccaccaccaccaccaccaccccgtgctgctgcacca
agaaagctgcaaacgggtgggaattttaaaacctcccagaagatatttgcaggcaatatt
cgacccgggcaggacattggtagctgggagaaacacacgagaggcattggccagaagctc
ctacagaagatgggctatgtaccgggcaaaggccttggaaaaaatgcacaaggtattgta
aaccctattgaggctaaagtgcgcaagggaaaaggggcagtgggagcgtatgggaatgag
aggacccagcagtcaattcaggactttccagtggtagattcggaggaagaagaggagatg
gagttccagagggaattggggcagtggcggaaagaacctggagcagtaaagaaaaagcct
aaatactcctttaaaactgtggaggaactgaaagctcatggaaaaatctccaacaagagc
atgagccaaccagctggagaacttgcacaagtcaaggtgatagatatgacaggccgggag
cagaaggtctactacagctacagccagatgagtcaaaagcacagcattcccgaggaggct
cctatgactgcaagtgcacgggagcagaagacctccagtttcactctgcctgaactcgaa
cacaaccttaaactactcatcgagctcactgaacaggatattttacagagctctcggcgt
ttgcagcatgagagggatacggtggtgtctctgaggcacgagagcacgaccctgcagact
cggttaagcgaggagagtgaggcagtggagcgtcttgagcaggtgctggagatggttgag
aggttggagacagctggggaaggaggtagccttccactttctcttgaagagtgtgtccag
gttttccagcaaatgcagacgcacttctacaacgagtacaagagcatggggctcgccgat
cttgcggtgtctgcggtgcatccactactgaatgagaaactcagaaactgggacccattg
aaggactgttcatatggtttcgaggaggtagggcagtggagagctattctagagaataca
caacttcaacatagtgtacctgacacaaatcacatggacccataccacaggttgatttgg
gaggtgtgggttcctgtgctgaggaactgtgtggcaaaatggcagcccagaaatgttggt
cctatggtggaccttgtggactgctgggctcctgtgctacccctctggattctcgactat
gtgctggagcagctcatcttcccacgcttacagaaagaggtggataactggaacccactg
acagacacggtgcccatccactcatggattcatccatggttgcctcagatgcagatgcgt
ctagagcccctgtactcacctatacgcaacaagctggcaaatgccctgcagcgttggcac
cccagtgacacttcagccagacttatcctgcagccttggaaagacgtcttcacacctgga
gcctgggaggccttcatggtcaaaaacattgtccctaaactagctctgtgtctaggggag
ctggtggtgaacccacatcagcagctgatcgacccattcaactgggtgatggactgggag
ggcatgttgtctctctccagtatggtgggattgcttgagaagcacttttttaacaaatgg
ctacaagtgttgtgctcttggttgagtaacaatcctaactatgaggaaatcactaagtgg
tatctgggttggaagggcatgctgtcagagcaactgcttagtcaccctctaattaaagag
aagctgaacgaggccttggacataatgaacagagctgtagcctctggaataggtggctat
atgcagcccggagcaaaggaaaacattgcgtacttgacccagaccgagagaaggaaagat
ttccagtatgagccaccagcaccaccacagcgcgagatcgagagcagcattccacgcctg
cccgtcagtggccctgtctcagctgctgtacccaccaacttcaaagacctgattcaggcc
aaagcagaagagaatggcattgtcttcatgcccatagtgggcaagcggcacatgggcaag
cagctgtacacgtttggccggattattatctatgtggagcggggtgttgtgtttgtccag
gggaaaaagacctgggttcctacttcactacagagtcttattgatatggccaaataa
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