Clarias gariepinus (North African catfish): 128510134
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Entry
128510134 CDS
T10780
Symbol
asxl1
Name
(RefSeq) putative Polycomb group protein ASXL1 isoform X1
KO
K11471
additional sex combs-like protein
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128510134 (asxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128510134 (asxl1)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
128510134 (asxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ASXH
PHD_3
HARE-HTH
Motif
Other DBs
NCBI-GeneID:
128510134
NCBI-ProteinID:
XP_053338148
LinkDB
All DBs
Position
22:9132852..9151219
Genome browser
AA seq
1652 aa
AA seq
DB search
MNSYINVCHIHSGTAPLACLVTMLHSQVRGDRVKNSIFFKLPGRMSLFTLKKNALQWTKN
PSGSEASDPSTAPAASSTASLGAAEGGEQESGDSTETTAASGENDASVDETSSSASCSTE
PQTRLSRSSQSGRQRKKSVMMPRVVLTPLKVNGEHVPSGAAGRRREGSRGGPGPVLRARS
ELGWKRPQHFKSMRGLRSGPMKRNRGGVEVDFETPGSILVNTNIRALINTRTFAAFPPHS
QQQLLQLLPEVDRQIGPDGLARLSSSALNNEFFTHASQSWKERLAEGEFTHEMQVRFRQE
MEKEKKVEAWKEKFFEEYHGQKSGLTREEALKLTMSDAGDVSGSVLGADTTAATPKRRGV
GRRRREGRIRRRSRADLRRRARRPLCKTTPAAVAQEPAETQAAVEVVAPTTSPVPETSTV
QAEVVLQAESESETPVETLCTEAAPSPAPVSTPAPASTSSTCDEPEGSTSLLPEVVEPTV
ASTSSPSSSSSSTSSSSSPSSSPSSTSDRQGAFAASSDSSSSSSSSTAAVATDPLDDGAS
ITTGTAGTGASSRESSPAASPATVSPAIQLKEQKRRPDESQAFTSFPEKRARLDEHQSFR
NTVDCVHSEKPQPTTEEPKVPPIRLSRIKPPWVKGPPTYQICPRIVPPSEGSRRSGTGAR
TLADIKARAQQARAQREAAAAVAATGDGAGPGGGGPGGGGGIPDCSSGRRSREHPGPVEP
GGGGGGRGGGGRVGDVEDQESLASSHSSGAQLQLSNVEHPEKTQASTPQTLPSPSSVSSN
PSVLPSESPKTFTASPTETDSPASQDQVDDICGGEEVTVSSSDKASEQTLDTPVPTPSEP
ESVGSQQESRVEEADSNDSRTLTPNYTISPVSSEAVNLVPTSIPDSLPRFGAQGVDVIRS
LAASSQPWEAEQNLGEHCSGTTGVIQHGSDVKVPKETFVATRNGFVSGAEDHVVRERVLQ
EHKSATEAETDGKYVSSLSCLPNNMREEDNGVHSDSTETASDFENETQEDDSVDWHRTMD
HNGVQGHNSKSQNHPVIQTPNRLTSCTLSSPQHQQPVIQAHVSNPTHSQTVIQARFPNGI
PNQPVIQTQKHHSVHTHGINHVQEQNSNALTQVHVQPYLMHVEKEQSKAHFLNESSSGGK
PFILTDDDSKLICKGPMDESGLKNFPSLSAVKRIQTSARPVSSVEANNPLVTQLLQGSLP
LEKVLPQSHSASKLEINRLPGAPTGLSSNRQPGGSPRNIAPRFRPPPESGGTTEPASSDF
QHKASSTHQSPVPGRNYGASPPATLQSRIGCLLDETSSRGTVVQQFVPQQSANNVPPGAV
PVITSLPSSSSSRHSVDLNSQSAQVLESAVIKEHPIPQISRSDTPERQAAGLQQHSVNHS
QPICRTTPDAPSPPHGDLCPSEVVPTVKISWRPPKSQPPQPQSYQQQISHGASVKNEVSL
RPSCQQALPKNSQAAMGGNGSVVITKKEPQSSLDSYTGSGGAMEGLLNMEMSLVRMAKKE
QGKNPFTRHTDSTVSPVSSSPSSTSASSFSYHLYGKLPKLQQSGGGSALTGDTGGGSSSG
FSYTANVSVVDGSGFSRSIADSVLQLRPRVGNTGSQSTALSIQAFAESAAEEVALKCSCR
LKAMIMCQGCGAFCHDDCIGPSKLCVSCLVVR
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atgaactcctatataaatgtctgtcacatacacagcggcacagccccactggcctgccta
gttaccatgcttcactcccaagtgaggggcgatcgagtaaagaacagcatcttcttcaag
ctacctggaagaatgagtcttttcacactaaagaaaaatgctctccagtggacgaagaac
ccatctggttctgaggcttcagacccaagcaccgcaccagcagcttcatccactgcttcg
ctcggagcagcagaggggggcgaacaggaaagcggtgactccacggaaacgacggctgcc
agcggtgagaacgatgcttcagtggatgagacttcctccagtgcctcctgttccacagag
ccacagacacgactaagtcgatcctcacagtcagggagacagaggaagaaatctgtcatg
atgcctcgagtggttcttactccactgaaggtcaacggtgaacacgtcccatcaggagct
gcggggaggcgcagggaagggtctagggggggtccaggcccagtacttcgagcccgctcc
gagctgggctggaaacgcccccagcacttcaagagcatgcgtggcctacgttcagggcca
atgaagaggaatagaggaggtgtagaggtggactttgagaccccgggctcaatcctggtc
aacacaaacatccgtgctttaattaacacgcgcacatttgcagcatttcctccccactct
cagcaacaacttcttcaacttctccctgaagtagacagacagattggtcctgatggtctt
gcccgactcagcagttcagcactgaataacgaattttttactcatgcctctcaaagctgg
aaagagaggctcgctgaaggtgagttcacacatgagatgcaggttcgctttagacaagag
atggaaaaggaaaagaaagtggaggcatggaaggagaaattctttgaggagtatcatggc
caaaaatctggcttaacccgtgaagaggcattaaaactcacaatgagtgatgcaggagat
gtttctgggtcagtccttggggctgatactactgcagccacacccaagaggagaggtgtt
ggaagacgacgaagggagggtcgtattaggaggcgatcacgtgctgacctcagaagaagg
gcgcgacgcccactctgcaagactactcctgcagcagtggctcaagaaccagcagagacc
caggcagctgtagaagttgtggccccgactacatcacctgtcccagaaaccagcacagta
caggcagaggttgtccttcaagccgaatcagaatcagaaactccagtggagacactatgt
acagaggcagccccctcccctgccccggtgtctactcctgctcctgcttctacaagctca
acttgcgatgaaccagaaggttccactagtctgctgcctgaagttgttgagcctaccgtt
gcctcgacttcctcgccttcctcatcctcttcttcgacatcctcatcatcctctccatct
tcatctccctcctctacctctgatcggcaaggagcctttgctgctagctctgactcatca
tcttcctcctcatcctcaactgctgctgttgccactgacccactggacgatggtgcctcg
atcaccacaggtacagcaggcaccggtgcgagcagcagagagagcagcccggcagcaagt
cctgctacagtcagccctgccatccagctcaaggaacagaaaagaaggcccgatgagtcc
caggccttcaccagctttcccgagaagagggcacggctggatgagcatcagtcctttcgt
aacacagttgactgtgtgcactcagaaaagccgcagcctacaacagaggagcccaaggtc
ccgccaatccggctctcccggatcaaacctccgtgggtcaaagggccgccaacgtaccaa
atctgtccccgcatcgtgccccccagcgaggggtcgaggcgcagtgggacgggggcgcgc
accttggcggacatcaaggcccgcgcccagcaagcccgcgcacagcgggaagccgctgct
gctgttgcagccactggggacggggcagggcctggggggggcggcccggggggtggtggt
gggataccggattgctccagcgggaggcgttcgagagagcacccgggtcccgttgaacct
ggaggaggaggaggaggaagaggaggaggaggaagagttggagatgtggaggaccaggaa
tcgcttgcaagctctcattcgtctggagcacaactacagttatccaatgtagagcatcca
gaaaaaacccaagcctctaccccacaaactttgccatctccatcctctgtatcttccaat
ccttcagtgctaccctcagagtcgcccaaaaccttcacagcatcaccaactgagacagac
agcccagcctcccaggaccaggtagacgatatctgtggcggagaggaggtgacggttagc
tccagtgataaagcctccgagcagaccttagacactcctgtgcctacccccagtgagccc
gagtctgtaggcagtcaacaagagagtagggttgaagaggctgattcaaatgacagcaga
acactcactcctaattataccatttcaccagtgtccagtgaagcagtaaatcttgttccc
acctcaattcctgactcattgcctaggtttggtgcccaaggtgtggatgtgatcagatcc
ttggcagcatcttcacagccttgggaagctgagcagaatttgggtgaacattgttcgggc
actactggggtcattcagcacgggtcagatgtgaaagtccccaaagagacatttgttgca
acccgcaatggttttgtaagtggtgctgaggatcatgtggttagggagagagttctgcag
gagcacaagagtgcaactgaggctgaaactgatggtaaatatgtaagttccctctcatgt
ctaccaaataacatgagagaggaagataatggtgtacacagtgactctacagagactgca
tcagactttgagaatgaaactcaagaggatgatagtgtggactggcacagaactatggac
cataatggcgtgcaaggtcataattcaaagtctcaaaaccatcctgtcattcagacacca
aatcgtcttacttcttgcactttgagctctccgcagcatcagcagcctgttatccaggcc
catgtctctaatcctacacacagccaaactgtcattcaggcccgtttccccaacggcatt
ccaaaccagccagtgattcagacacaaaagcaccattcagttcacacccatggcataaac
catgtccaggagcaaaactccaatgccttgacccaggtccatgtgcagccatacctcatg
catgtagagaaggagcaaagcaaagctcattttctaaatgagagtagcagtggaggaaag
ccatttatcctaacagatgatgattcaaaacttatctgcaaagggcctatggatgaatct
ggattaaagaactttcccagtctttctgctgttaagagaattcaaacctctgcacgacct
gtgtcctctgtagaggcaaacaaccctctggttacccagcttcttcaaggcagcctgcct
ttggagaaagtccttccccagtcacactctgcaagtaagctggagataaatagactacca
ggagcaccaacaggtttgtcttcaaaccgacagcctggaggatctcccagaaacatagct
cctcgcttcagacccccacctgaatcagggggaaccacagaacctgctagctcagacttt
cagcataaagcctcttctactcatcagtcacctgtgcctggaaggaattatggtgcctca
ccacctgccactttacagtcgcgaataggatgcctgcttgatgaaaccagctcccgtggc
acagttgtccagcagtttgttcctcagcagtctgcaaacaatgtgcctcctggtgcagta
cctgtcatcacctccctcccatcatcttcctcctcaaggcattcagtggacttgaactct
caaagtgcccaagttttggagtcagctgtgataaaagagcaccccatccctcagatttca
cgtagtgacactccagaaaggcaagcagctggtcttcagcaacactccgttaaccattcc
cagccaatctgcagaactacacctgatgctccttcccctccacatggtgacctttgtcct
tctgaagttgtacctactgttaagatcagttggcgcccgccgaaatcgcagccaccccaa
cctcagtcctatcaacaacagatctctcatggggctagtgtgaaaaatgaagtctctcta
cgcccctcgtgccagcaagctctaccaaaaaattcacaggctgcaatgggtggcaatggc
tctgttgttataaccaaaaaagaaccccagagctccttggacagttatacaggaagtggg
ggagccatggaaggactgcttaatatggaaatgtcccttgtaagaatggctaaaaaagag
caaggtaaaaaccctttcacacgtcatactgactccacagtctcacctgtgtcgtcctct
ccttcatctacctctgcctcatcattttcctaccatctgtatggaaagttgcctaagttg
cagcagagtggaggtggaagtgcactgactggagacactggaggggggtcctcatctggc
ttcagctatacggcaaatgtctcagtagtggacggtagtggcttctctcgcagcatagca
gatagtgtgctgcaactgcggccacgtgttgggaacactggaagccagagtactgccctg
agtatccaggcatttgctgaaagtgcagcagaggaggtggctcttaagtgctcttgccgc
ctcaaggccatgattatgtgccaggggtgcggtgccttctgccatgacgattgcatcggc
ccttccaaactctgtgtttcctgtctggtggttagatag
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