KEGG   Clarias gariepinus (North African catfish): 128510186
Entry
128510186         CDS       T10780                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128510186
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgar03019]
    128510186
   03041 Spliceosome [BR:cgar03041]
    128510186
Messenger RNA biogenesis [BR:cgar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     128510186
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     128510186
Spliceosome [BR:cgar03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    128510186
SSDB
Motif
Pfam: RRM_1 RRM_PARP14_3 RRM_7 Nup35_RRM_2
Other DBs
NCBI-GeneID: 128510186
NCBI-ProteinID: XP_053338255
LinkDB
Position
22:23248548..23252143
AA seq 376 aa
MSKEPREPEQLRKLFIGGLSFETTDDSLRSYFEQWGTLTDCVVMRDPNSKRSRGFGFVTY
SCVEEVDAAMAARPHKVDGRLVEPKRAVSREDSNRPFAHTTVKKIFVGGIKEDTEEDHLR
DYFEKFGKIEAIEIMVDHKTGVRRGFAFVTFDDHDAVDRIVIQKYHTINGHNSEVRKAVS
KQEMQSSSMNMRGRGGGNFGRYGNDFGGGRDGFRDGFRGGRGGYGGGDGYNSGFGGDGGY
GGSGGGYGGNRGGGYGGGGQGYGSGGGGGGYGGGGYGGGGGGGSGYDNYNNGNGNFGGNF
GGGGGGGSSGNYNDFGNYNNQQSNFGPMKGNYGGGGGGGRNSGPYGGGGYGGSSGGGGGY
GGGSSGGYGGNSGRRY
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgtcgaaagagccacgagaaccggagcagctccggaagttgttcatcggaggcctgagc
ttcgagacaacagacgacagcctgcgatcttattttgagcaatggggcacgttaaccgac
tgtgtggttatgagagatccgaactccaagcgctccagaggcttcggtttcgtcacatac
tcctgtgtggaggaagtcgatgctgccatggcggcacgtcctcacaaagtcgatggccgc
cttgtagagcccaagcgtgctgtgtctagagaggattccaacagacccttcgcgcacact
acagtgaaaaagatctttgtgggtggcatcaaggaagacacagaagaggaccatctacgg
gactactttgagaaatttggaaagatcgaagcaattgaaatcatggtcgaccacaagact
ggtgtcagaagaggctttgcatttgttacatttgatgaccatgatgctgtggatcgtatt
gttattcaaaagtaccacacaataaatggccataattcagaagtcagaaaggctgtgtct
aaacaagagatgcagagttcatcaatgaacatgagaggccgtggaggtggaaactttgga
cgatatggcaacgactttggaggaggcagagatgggtttagagatgggttcagaggtggc
agaggtggatatggtggtggagatggatacaacagtggctttggtggtgatggtggttat
ggtggtagcggcggtggctatgggggaaaccgtggtggaggatatggtggcggtggacaa
ggctatggaagcggcggtggtggcggaggatatggcggaggaggatatggtggtggtggt
ggcggcggcagtggttatgacaactataacaacggcaatggaaactttggcggcaacttc
ggaggtggtggtggcggcggcagtagtggcaactacaatgactttggaaactacaacaac
cagcagtcaaattttggcccaatgaagggaaactatggcggcggcggaggtggcggcagg
aatagcggcccctatggtggtggtggatatggtggtagctcgggtggaggtggaggatat
ggcggtggctccagtggtggatatggaggaaactcgggcagacgatactaa

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