KEGG   Clarias gariepinus (North African catfish): 128510210
Entry
128510210         CDS       T10780                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128510210
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgar03019]
    128510210
   03041 Spliceosome [BR:cgar03041]
    128510210
Messenger RNA biogenesis [BR:cgar03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     128510210
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     128510210
Spliceosome [BR:cgar03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    128510210
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RRM_PARP14_1
Other DBs
NCBI-GeneID: 128510210
NCBI-ProteinID: XP_053338297
LinkDB
Position
22:23257118..23261173
AA seq 374 aa
MPKEEQPREPEQLRKLFIGGLSFETTDDSLRSYFEQWGTLTDCVVMRDPNSKRSRGFGFV
TYSCVKEVDAAMEARPHKVDGRLVEPKRAVSREDSNKPFAHTTVKKIFVGGIKEDTEESH
LRDYFQEFGKIEAIEIMIDHKTGNKRGFAFVTFDDHDAVDRIVIQKYHTINGHNSEVRKA
LSKQEMQNSSMNMRGRGGGNFGGRYGNNDFGGGRDGFRDGFRGGRGGSGGYGGGDGYNNG
FGDGGYGGGGPSYGGRGGGYGGGGGPGYGNNGGGGYGGGGYGGGGGYGGGGGNYDNYNNG
GGNFGGGNFGGGGGGNGNYNDFGNYNNQQSSFGPMKGSYGGGGGGRNSSPYGGGYGGSSG
GGGGYGGGSGGRRY
NT seq 1125 nt   +upstreamnt  +downstreamnt
atgccaaaggaggagcagccccgagaaccggagcagctccggaagttgttcatcggaggc
ctgagcttcgagacaacagacgacagcctgcgatcttattttgagcaatggggcacgtta
accgactgtgtggttatgagagacccgaactccaaacgctccagaggcttcggtttcgtc
acgtattcgtgcgtgaaggaagtcgatgctgccatggaggcacgtcctcacaaagtcgac
ggtcgtctagtagagcccaaacgcgccgtgtctagagaggattccaacaaaccctttgca
cacactacagtaaaaaagatctttgtggggggcatcaaggaagacacagaagaaagtcat
ctacgggactacttccaggaattcggaaagatcgaagcaatcgaaataatgattgaccat
aagacaggcaacaaaagaggttttgcatttgtgacgttcgatgaccacgatgccgtagat
cgtattgtcattcaaaagtaccacacgataaatggccataattcagaagtgagaaaggcc
ctctcgaaacaagagatgcagaactcatcaatgaatatgaggggacgtggaggtggaaac
ttcggtggtcgatatggcaacaatgactttggaggtggcagagatgggttcagagacgga
ttcagaggaggcagaggtggcagtggagggtatggaggtggagatggctacaacaacgga
tttggagatggtggatatggtggaggcggtcctagctacggaggccgtggtggaggatat
ggtggtggaggaggaccaggctacggtaacaatggtggtggaggctacggtggtggcgga
tatggaggcggaggaggatacggtggtggtggcggcaactacgataattataacaacggc
ggtggaaactttggaggcggtaacttcggtggaggtggtggaggtaacggaaactacaat
gactttggaaactacaacaaccagcagtcaagttttggccccatgaaaggaagctatggt
ggtggaggtggcggcaggaatagcagcccttatggtggtggctatgggggtagctcagga
ggcggtggaggttatggcggaggctctggtggtagacgatattaa

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