Clarias gariepinus (North African catfish): 128510236
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Entry
128510236 CDS
T10780
Symbol
rprd1b
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1
KO
K15559
regulator of Ty1 transposition protein 103
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgar03021
]
128510236 (rprd1b)
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
128510236 (rprd1b)
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Gene cluster
GFIT
Motif
Pfam:
CREPT
CID
CTK3
MalF_P2
Motif
Other DBs
NCBI-GeneID:
128510236
NCBI-ProteinID:
XP_053338346
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All DBs
Position
22:complement(26280661..26288866)
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AA seq
332 aa
AA seq
DB search
MSSFSESALEKKLSELSNSQQSVQTLSLWIIHHRKHSSAIVRVWHKELKKAKSSRKLTFL
YLANDVIQNSKKKGPEFTRDFEGVLVDACSHVARETDESCRKHMERLLNIWQERSLYRSD
FIQQLKLAIEDSNSPRHKSAEEKKGVKRTIQKVQEEEEEEDDDDYRAHYSPHEADTNGPQ
LTEELVKALQDLENAASGDATVRQKIASLPQEVQDVSLLEKITADKEAADKLSKTVDEAC
LLLAEYNGRLAAELEDRRQLARMLTEYINSQKEALSEREKKLEEYKQKLARVTQVRKELK
SHIQSLPDLSLLPNVTGGLAPLPSAGDLFSTD
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgttttctgagtctgcgttggagaagaagctgtccgagctgagtaattcgcag
caaagcgttcagaccttgtcgctctggatcatccaccaccgcaagcattcgagcgccatc
gtccgtgtgtggcataaagagctaaaaaaagccaaaagcagccgcaagctgaccttcctt
tacctcgccaatgacgtcattcagaacagcaagaagaaagggcccgagttcacgcgggat
tttgaaggcgtcctcgtcgatgcctgctcgcacgtagcgagagaaactgatgagagctgc
agaaagcacatggagaggctgttaaacatctggcaggagcgcagtctctaccgttctgat
ttcatccagcagctcaaactcgccatcgaggactcgaacagccccagacacaaaagtgcg
gaagagaagaagggcgtaaaaagaacaatccagaaggttcaggaagaggaagaggaggag
gatgacgatgattacagagctcactattctccccatgaggcagacaccaacggcccacag
ctgacggaggagctggttaaagccctgcaggacctggagaacgccgcgtccggagacgcc
accgtgcggcagaagatcgcctctctgcctcaggaagtgcaggacgtttctctgctggag
aagatcacagcagataaagaggcagccgataagctttccaagacggtggacgaagcgtgt
ctgctgctggccgagtataacgggagactggcggccgagctggaggaccgcagacagctg
gcgcgcatgctcaccgagtacatcaacagccagaaggaggcgctgagcgagagagagaag
aaactcgaggagtacaagcagaagctggctcgggttactcaggtgcgcaaagagctgaag
tctcacatccagagtctacctgacctctcgctgctgcccaacgtcaccggaggactcgca
ccgctgccctcggccggagacctgttctccaccgactga
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