Clarias gariepinus (North African catfish): 128510395
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Entry
128510395 CDS
T10780
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04110
Cell cycle
cgar04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
128510395
04114 Oocyte meiosis
128510395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128510395
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
128510395
Meiosis-specific proteins
Cohesin complex and associated proteins
128510395
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_29
AAA_15
ABC_tran
Motif
Other DBs
NCBI-GeneID:
128510395
NCBI-ProteinID:
XP_053338626
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Position
22:complement(2063836..2078000)
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AA seq
1232 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQENSGEERAFTRVIIGSSSEYRINSKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVVRANVQLQLFKLYHNECEIEKLNR
ELGQRNKEIDKDRKRMDRIEDELKEKKKELGRMMRDQQTVEKEIKEKDAELNQKRPQYIK
AKENTAHKIKKLEAARKSLQNAQKCYKKRKADMDELEREQRAVETARQEFEERMEEEAQS
QGQDLQLEENQVKAYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLDDYITTSRQSLDEQKRMEEELTDEVEQAKRRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPQIKKALQYACGNALVCENVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKDRKEKLTDELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIQSREREMKELKDRMNLVEDEVFLEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLAIQLDYEKNQLKEDQEKVIMWEQ
TVKKDESEIERLKKEEQRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHEMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIKLPLKSGTMDDISQEEGSSQEE
SMNSSQKTSSSVLAKEALIEIDYSSLSEDLKDSLSEEEIKGEMSTLQQRLNEQQSILQRI
SAPNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFHACFESVSTN
IDEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALAL
LFAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSIENFQAIVISLKEEFYTKADSL
IGVYPEQGDCVISKVLTFDLSLYPDANPNPNE
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttaaaattaatcgagatagaaaattttaagtcgtacaaaggaagacaaata
atcgggcctttccacaagtttactgcgattattggaccgaatggatcaggcaagtcaaac
ctcatggacgccatcagctttgtgctggcggagaaaaccagcaacttgcgtgtgaaaaca
ctgaaggatctgatccacggcgcccctgtggggaagccggcggcgaaccgcgcctttgtc
agcatggtgtaccaggagaacagcggggaagagcgcgccttcaccagagtcatcatcggc
tcctcatcagaatatcgcatcaatagtaaagtagtgggattacccgagtacagcgaggag
ctggagaaactcggcattctcatcaaggccaggaacttcctggtgtttcagggtgcagta
gagtccatcgccatgaagaacccgaaagagcgcacggccctgttcgaggagatctctcgc
tccggggagctggctcaggagtatgaccggcgcaagaaggagatggtgaaggccgaggag
gacacgcagttcaactaccaccgcaagaagaacatcgctgctgagcgcaaagaggccaag
caggagaaagaggaggccgagcgttaccagaggctgaaggacgaagtcgtgcgcgcaaac
gtacagctgcagctcttcaagctctatcacaatgagtgcgagatagagaaactgaaccgc
gagctgggacagcgcaacaaggagatcgataaggaccgcaaacgcatggaccgcatagag
gacgagctaaaggagaagaagaaggagctcgggaggatgatgagagatcaacagaccgta
gagaaagagatcaaggagaaggacgcagagctgaaccagaagcggccgcagtacatcaag
gcgaaagaaaacacggctcacaagatcaagaagctagaagccgcacgtaaatcccttcaa
aacgcccagaagtgctacaaaaagcgcaaggcggacatggacgagctggagcgcgagcag
agggctgtggagacagcccggcaggagttcgaggagcgtatggaggaggaggcgcagagt
caaggccaggacctgcagcttgaagagaaccaggtcaaagcgtatcaccgtctgaaagaa
gaggctagcaaacgagccgctacactcgcccaggagctggagaagtttaaccgcgaccag
aaagccgaccaggaccgcctagatctggaggagagaaagaaagtggagacggaggcgaag
atcaagcagaagatcagagagattgaggagaaccagaagcgtattgagaagctcgacgat
tacatcacgaccagcagacagtctctggatgaacagaagaggatggaggaggagctcacg
gatgaggtggagcaagccaagaggaggattgatgagattaacatggagcttaaccaggtg
atggagcagctcggtgacgcccgtatagacagacaggagaacagcagacagcagcgcaaa
gccgagatcatggagagcatcaaaagactctaccctggatcagtgtacgggaggctcata
gacctgtgccagcccactcagaagaagtatcagatcgctgtaaccaaagtgctgggcaag
aacatggacgctatcattgtggactcggagaagaccggccgtgactgcatccagtacatc
aaagagcagagaggagaaccggaaaccttcttacctctggactatcttgaggtcaaacct
acagacgagaagctgcgtgagctgcgcggcgccaaactggtgatcgacgtcatccgctac
gagccgccacagatcaagaaagctctgcagtacgcctgcgggaacgcgctcgtgtgcgag
aacgtcgaggatgctcgcaggatcgctttcggaggaccgtacaggcacaagaccgtcgct
ctagacgggactctgttccagaagtctggtgtgatctccggaggtgccagcgacctgaag
gccaaagctcgccgctgggacgagaaagccgtggacaagctaaaggacaggaaagagaaa
ctcacagatgaactcaaggagcaaatgaaggcgaaaagaaaggaggcggagcttcgtcag
gtgcagtctcaggctcacgggctgcagatgaggctgaagtactctcaaagcgacctcgag
cagaccaaaacgcgccacctgtctttaaacatgcaggaaaaatccaagctagaaagcgaa
ctggccaactttggtccccgtatcaatgacatcaagaggatcatccagtcacgtgagagg
gaaatgaaggagctgaaagaccgcatgaacctggttgaggacgaagtgtttttggagttc
tgcaaagagatcggtgtgaggaacattcgcgagtttgaagaggagaaagtgaaaaggcaa
aacgagatcgcaaagaagcgcttggagttcgagactcagaagactcgtctagcgatccag
ctggattacgagaagaaccagctgaaggaggaccaggagaaagtcatcatgtgggagcag
acagtgaagaaggacgagagcgagatcgaaagattaaagaaggaggagcagaggcacatg
aagatcatcgatgagaccatggctcagcttcaggacctgaagaatcagcacctcaccaag
aagtcagaggtgaacgacaaaaaccatgaaatggaagaaatccgtaagaaactcggcgga
gccaacaaagagctgacccagcttcagaaggaggtcacggccattgaaacgaagctggag
cagaagcgcagtgacagacacaacctgctccaggcctgtaaaatgcaggacatcaaactt
cctctcaaatcaggaaccatggacgacatcagtcaggaggagggaagctcccaggaagaa
agtatgaatagcagccagaaaacgtccagctccgttttagccaaagaggctctgattgag
atcgactacagcagcctgtctgaagacctgaaggactcgctgtctgaggaagagattaaa
ggtgagatgagcacccttcagcagaggcttaacgagcaacagagcatcctccagaggatc
agcgctcctaacatgaaggccatggagaagctggagagcgtccgagacaaattccaggag
accagcgacgaattcgaagccgccaggaagagagcaaagaaagccaagcaggcgttcgag
cagatcaagaaggagaggttcgatcgcttccacgcctgcttcgagtccgtctctacaaac
attgatgagatctacaaagcgctctcgcggaacagcagtgctcaggcttttctcggcccg
gagaacccagaggaaccgtacctcgatgggatcaactataactgcgtggcccctgggaaa
cgttttagacccatggataatttatcaggaggagagaagaccgtggccgctctcgcttta
ctcttcgccatccacagctataaacccgctccgttcttcgtgctcgatgaaatcgacgcc
gctctggacaacaccaatatcggcaaggtcgctaactacatcaaagaccagtccatcgaa
aacttccaggctatcgtcatctcgctgaaggaggagttttacaccaaggctgactcgctc
atcggcgtataccccgagcaaggagactgcgttatcagtaaggtcctgacctttgacctt
tccctgtatccagacgcaaaccccaaccctaacgagtag
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