Clarias gariepinus (North African catfish): 128510608
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Entry
128510608 CDS
T10780
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03250
Viral life cycle - HIV-1
cgar04623
Cytosolic DNA-sensing pathway
Brite
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
128510608 (samhd1)
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Other DBs
NCBI-GeneID:
128510608
NCBI-ProteinID:
XP_053339000
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Position
22:complement(3727964..3745211)
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AA seq
628 aa
AA seq
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MDSRKRPREEPLCMEGFKTPEKQGLTEKLRKDDGNFKHWDSEETCAYLRQQGLGEWEQKF
REQKITGIGLRYLTDQQLEKMGIEPLGSRLQILHCLSNLWQISSDRMKVFNDPIHGHIEL
HPLLVRIIDTPQFQRLRHIKQLGATYMVFPGAAHNRFEHSVGVGYLAGCLIQELNEKQPE
LLITKQDILCVQIAGLCHDLGHGPFSHMFDGMFIPKVRPGLGWKHEKASVQMFDHLVKVN
NLEGVMREYGLSLPNDLIFIKEQIAGPLDSAVSPASQWPYKGRTEEKSFLYEIVANKRTG
IDVDKWDYFARDCYHLGIQNNSDYRRFLKFARVCKVKGKKHICTRDKEVGDLYDMFHTRN
CLHRRAYQHKVGNIIEVMITEALVKADPYIQIRGSSGKMYNISEAIDDMEAYSKLTDHIF
EQILYSSDPALSEAQDILQDIICRRLYKCVGQTTPNNYYDVSEEMLSEWASEVSECKPEG
TVVDLMPEDFVVNVICMDYGMKEKNPVNNVYFYCKNDPTKAIKIRKNQVSKLLPEQFAEQ
LIRVYCKKTDEKNLEAAYKYFVQWCMSRNFSKPQDGDVTAPELTPLKQEWQNEDDTDSQS
VDDGRGQRAVNGRNHIKTNLIPRKLDGF
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggacagccgaaagcgcccgagagaggagcctctgtgcatggagggctttaaaacccca
gagaagcagggtttaaccgagaaactgcggaaggatgatggaaattttaagcattgggac
tccgaggaaacatgcgcatatctccggcaacaagggctcggagagtgggaacaaaaattt
agagaacagaagataaccggaatcgggctgcgctacctcactgatcaacagctggaaaag
atgggcatagagccactgggctccaggcttcagatcctccactgtctcagcaacctctgg
cagatctcatctgaccgcatgaaggtgttcaatgatccgattcacggccacatcgagctc
catcctctgctggtgcgcatcatcgacactcctcaattccaacggctgcggcacatcaaa
cagctgggtgccacgtacatggtgtttcctggagccgcccataaccgcttcgaacattcc
gtaggcgtcgggtatttagcaggctgtctcatccaagagctgaacgagaaacagcccgag
ctcctcatcaccaagcaagacatcctgtgtgttcagattgccggcttgtgtcatgacctg
ggtcatggtccgttctcccacatgttcgacggaatgtttattcctaaagtccgacctgga
ctgggatggaagcacgagaaggcgtcagtgcagatgtttgaccacctggtgaaagtgaat
aatctggagggtgtgatgagggagtacggtctctctcttcccaacgacctcatcttcatt
aaagagcagatcgccgggccgctggactccgccgtctccccagccagccagtggccgtac
aagggcaggacggaggagaaatcattcctgtacgagatcgtagctaataagaggaccggc
atcgatgtggacaagtgggattattttgcacgggactgctatcacctgggcatccaaaac
aactccgactaccgtcgcttcctcaagttcgctcgagtgtgtaaggtcaagggcaagaaa
cacatctgcacccgagacaaggaagtaggtgatttgtacgacatgttccacactcggaac
tgtcttcaccgccgagcgtaccaacacaaagtggggaacatcatcgaggtcatgataaca
gaagctctggtaaaggcagatccttacatccagattcggggctcttcaggaaagatgtac
aacatttcagaagccattgatgacatggaggcttacagcaaacttacagatcacattttc
gagcagatcctgtactcgtccgatccagcgctctccgaagctcaggacatcctgcaggac
atcatctgcaggcgtctgtacaaatgcgtgggacagaccacgcccaacaattactatgac
gtgtcagaggaaatgttatccgagtgggccagtgaggtgtccgagtgcaaacctgagggc
actgtggtggatttgatgcctgaggacttcgtagtcaatgtgatctgtatggattacgga
atgaaggagaagaaccctgtgaacaacgtttacttctactgcaagaacgacccgactaaa
gccatcaagatccgcaagaaccaggtgtccaaattgttgcccgagcaatttgccgagcag
ctgatccgagtttactgcaaaaaaacagacgagaagaatctggaagcggcgtataagtac
tttgtgcagtggtgcatgtcgagaaatttctccaaaccgcaggatggtgatgtcaccgca
cccgagctcacgccactaaagcaagagtggcagaatgaagatgatacagactcccagagc
gttgatgatggcagaggtcaaagggcggtcaatggtcgaaatcatataaaaacaaacctg
atcccacgtaaattagatggtttttag
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