Clarias gariepinus (North African catfish): 128510617
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Entry
128510617 CDS
T10780
Name
(RefSeq) acidic mammalian chitinase-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00520
Amino sugar and nucleotide sugar metabolism
cgar01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
128510617
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
128510617
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
CBM_14
DUF4766
Motif
Other DBs
NCBI-GeneID:
128510617
NCBI-ProteinID:
XP_053339011
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Position
22:7804478..7807655
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AA seq
499 aa
AA seq
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MGKVVLVSALALLLHMQLGSAYILSCYFTNWAQYRPPPTIYMPNDIDPCLCTHLLYAFAT
MTNDYKIATYEWNDVELYSQFNALKDKNGNLKTLLSVGGWNFGSSGFSAMVASSANRQTF
INSVIVFLRKYEFDGLDIDWEYPANRGSPPQDQQLFSVLLAEMRAAFEAEAKQTNRARLL
MSAAVSSGRGTIETAYQIPQLGQSLDMINVMSYDMHGSWDPFTGECSPLYRDSFDSGSYV
YFNVDYAMNYWMNNGAPAEKLLVGFPTYGNTFTLSNPANHGIGAPISGAGTAGKYTQEAG
ELAYFEICTFLQGGATEVWNSQQDVPYAYQGNQWVGYDNIKSFQIKAQWLMKSNFGGAMV
WTIDMDDFLGTFCNQGKYPLINVLHKALNLDQQTCSPPATPLPPIPGVSTTTASASGGSS
NGGSSSSGSSSGGSSSSGSSSSGGTSGMNSSFCAGKASGLYPFAAKSNKFYECNAGQTYF
QQCATGLVFDTSCSCCNWS
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggggaaggtagtcctggtttcagcattggccctgctgcttcatatgcagcttggctca
gcctacattttatcatgctacttcaccaactgggcacagtatcgcccccctcccaccatt
tacatgcccaatgacatcgacccttgcctgtgtacccatctcctctatgcttttgccacc
atgaccaatgattacaaaattgccacatatgagtggaatgatgtggagctctacagccaa
ttcaatgccctgaaggacaaaaacggcaacttgaaaactttgctgtcagttggtgggtgg
aactttggctcttcaggattttctgccatggtagccagttctgccaaccgccagacgttc
atcaattctgtaattgtttttctgaggaagtatgaatttgatggattggatattgactgg
gagtacccagcgaacaggggaagcccaccacaagatcagcaactgttctctgttctgtta
gctgaaatgagggctgcatttgaggcagaggccaagcaaaccaacagagcccgactgctg
atgtctgctgctgtctcatcaggccgaggcacaattgagactgcttaccagattcctcag
cttggacaatcactggacatgattaatgttatgtcctatgacatgcatggatcatgggat
ccttttacaggagagtgcagccccttgtacagggattctttcgacagtggatcttacgtt
tactttaatgtggactatgccatgaattactggatgaacaatggtgctcctgcagagaaa
cttcttgttggattccccacctatggaaacacttttacattgtcaaacccagccaaccat
ggaattggagctccgatctccggagctggaacggcaggaaaatacactcaggaagctggg
gaattggcatattttgagatctgtaccttcctgcaagggggcgcaactgaggtgtggaac
tctcaacaagatgtgccatatgcctatcagggaaatcagtgggttggctatgacaatatc
aagagttttcagattaaggcccagtggctgatgaaaagcaactttggtggtgctatggtg
tggaccattgacatggatgactttctgggcactttctgtaaccagggcaaataccctctg
attaacgtgcttcacaaggccttgaacctggaccaacaaacttgcagtcctcctgcaact
ccacttcccccaataccaggagtgagcaccacaaccgctagtgccagtggaggcagttct
aatggaggaagctcaagcagtggaagctccagcggtggaagttccagcagtggaagctcc
agcagtggaggcacaagtgggatgaacagctccttctgtgctggcaaagccagtggtctg
tacccatttgctgccaaaagcaacaagttctacgagtgcaacgcaggtcagacttatttc
cagcaatgtgccactggcctggtgtttgacacaagctgctcttgctgcaactggagctaa
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