Clarias gariepinus (North African catfish): 128510721
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Entry
128510721 CDS
T10780
Symbol
krt5
Name
(RefSeq) keratin, type II cytoskeletal 5
KO
K07605
type II keratin, basic
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128510721 (krt5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgar04812
]
128510721 (krt5)
04147 Exosome [BR:
cgar04147
]
128510721 (krt5)
Cytoskeleton proteins [BR:
cgar04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
128510721 (krt5)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
128510721 (krt5)
Exosomal proteins of other body fluids (saliva and urine)
128510721 (krt5)
Exosomal proteins of colorectal cancer cells
128510721 (krt5)
Exosomal proteins of bladder cancer cells
128510721 (krt5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Keratin_2_head
TPR_MLP1_2
CENP-F_leu_zip
ADIP
ATG16
CENP-Q
Phage_GP20
SlyX
Baculo_PEP_C
TolA_bind_tri
DUF6236
APG6_N
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-GeneID:
128510721
NCBI-ProteinID:
XP_053339168
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All DBs
Position
22:16767677..16771830
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AA seq
643 aa
AA seq
DB search
MDYKCCTAPQRRHSEGPSSLSSPSPLHLHILSPAAMSISFQSSTMSSRGGGGASFGGGSF
GSSGGGGFVRRNFSSQSYSAPSSSRMSYGASFRHGGAGIGFGAGGGGGIVASSGFSLGSS
AGSYGGGYGGLGAGSAFGAGASFGGGAGLGGGAGFGGGTGFGGGAGFALGRGGGGGGGFA
GFIPPTITAVTVNPGLLTPLKLEIDPNIQLVRTQEKEEIKTLNNRFASFIDKVRFLEQQN
KMLETKWSLLQEQTTSRSNIDAMFEAYIANLRRQLDGLGNEKIKLEGELKNMQGLVEDFK
NKYEDEINKRATAENEFVVLKKDVDAAYMQKIELEAKVDALQDEINFLRAVYDAELQELQ
GQIKDTSVVVEMDNSRNLDMDAIVSEVRAQYEDIANRSRAEAESWYKAKFEEMRVSAGTH
GDDIRNTKTEIAELNRMITRLQNEIEAVKGQRASLESQIAEAEERGELAVNDAKQRIKEL
EEALQRAKQDMARQVREYQELMNVKLALDIEIATYKKLLEGEEIRIATGGGKTTVHIQDT
SISGGSGGGYGGGYGGGYGGGGYGVGGGSGGGFGSGLGYGGGAGLSLGGGGGGGSFGLSS
GLALGSGGGGGGAFGSHSGYSLSGAGGSGYSISRASTISSSRY
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggactataaatgctgcacagctccacagagaaggcactcagagggaccatcctcgctc
tctagccctagccctctccaccttcacattctctcaccagcagccatgagcatcagtttc
cagagctccacaatgtcttccaggggaggcggtggagctagctttggaggtggcagcttt
ggaagtagcggtggaggtggatttgtgaggaggaacttctccagccagtcctatagtgca
cccagctcctccagaatgagctatggtgctagcttccgccatggtggtgctggtataggc
tttggtgctggtggtggtggcggcattgttgctagctcaggcttcagtctgggcagcagt
gcgggatcctatggaggaggctatggtggcttaggtgcaggtagcgcctttggtgcaggt
gctagttttggtggaggtgctggtcttggtggaggtgctggttttggtggaggtactggt
tttggtggaggtgctggttttgctcttggaagaggaggaggaggaggaggaggatttgct
ggttttattccacccacaatcactgctgtcacagtcaacccaggcctccttactccacta
aaattagagattgaccccaacatccaactcgttcgcacccaagagaaagaggagatcaag
acactcaacaaccgctttgcctccttcattgacaaggtgcgtttcctagagcaacagaac
aagatgttggagaccaagtggagcctccttcaggaacagaccacgtcacgctcaaacatt
gatgcaatgttcgaggcttacattgctaatctgcgcagacaactggatggccttggaaat
gagaaaattaagctggagggagagctgaaaaacatgcagggtttggtagaggacttcaaa
aacaaatatgaagatgaaatcaacaagcgtgctaccgcagagaatgaatttgttgtcctt
aagaaggatgttgatgcagcctacatgcagaagattgagcttgaagctaaagttgatgca
cttcaggatgagatcaactttctcagggctgtctacgacgcggagctgcaggagcttcaa
ggacagatcaaggacacatcagttgttgtcgagatggacaacagtcgcaacctggacatg
gatgccattgtatctgaggtccgtgctcagtatgaggacatcgccaatcgcagtcgggct
gaggctgaatcatggtacaaggcgaaatttgaggaaatgagggtgtctgctggcacccat
ggtgatgacatacgtaacaccaagactgagattgcagagctcaaccgcatgatcacacga
ctccagaatgaaattgaggcagtcaagggacagcgggccagcctggagtcacagattgca
gaggctgaggaacgaggtgaattggcagtaaatgatgccaaacaacgtattaaggaacta
gaagaagccctgcagagagctaagcaggacatggcacgacaagtgcgtgaataccaggag
ctgatgaatgtcaaactggctctggacattgagatcgccacttacaagaaactcctggaa
ggagaagagattaggattgcaactggtggtggaaagacaacagtccatattcaggacact
tccattagtggtggatctggcggtggttacggcggtggttacggtggtggttacggcggt
ggtggttacggcgttggtggcggcagtggtggcggattcggcagtggactgggctacggc
gggggagctggccttagtttgggaggaggtggtggtggtggcagctttgggcttagtagt
ggcctggcccttggtagtggtggtggtggtggaggagcatttggatctcactctggatac
agtttaagtggagccggcggtagtggatattccatatctcgtgcctccacgatatcttcc
tcccgctactaa
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