Clarias gariepinus (North African catfish): 128510732
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Entry
128510732 CDS
T10780
Symbol
nfascb
Name
(RefSeq) neurofascin
KO
K06757
neurofascin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04514
Cell adhesion molecule (CAM) interaction
cgar04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
128510732 (nfascb)
04517 IgSF CAM signaling
128510732 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgar04515
]
128510732 (nfascb)
Cell adhesion molecules [BR:
cgar04515
]
Immunoglobulin superfamily
L1 family
128510732 (nfascb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Ig_VEGFR-1-like_5th
Bravo_FIGEY
V-set
Ig_4
Ig_PDGFR_d4
Ig_6
Ig_5
Fn3_ROS1
Motif
Other DBs
NCBI-GeneID:
128510732
NCBI-ProteinID:
XP_053339193
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All DBs
Position
22:complement(13503456..13518854)
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AA seq
1151 aa
AA seq
DB search
MRTESLWKIVAAFILLLRIWKEVSALEIPADVRQPPIIIKQSIQDHIVEPTDPIIVECEA
TGNPPPVFTWTRNGVYLNVARDPQVTMKRRSGTLEIFFWGRPDDYEGVYQCTATNEFGSA
LSSHINLRVSKARTWLKEYLEPVSVFVGLPLILSCNPPVGPPRPQTYWMNSSMVPIRQDR
RVSMAENGDLMFSSVIAEDGLTNYVCTARFPNSNIIHQKPPLILQVHTARMAAQNLPKFL
KPKGTASSQIAMLGEELILECFASGVPAPTIKWSKDWGSLSMEGMKLENFNKTLRIKKIS
MDDGGSYICTATNKMGSMDHTITVKVKSTPFWVRKPENLILSRDDSGQIVCQADGIPRPQ
IQWLVNGEPIEDAPKKPGRQVSGDTLIFRAVVPDSTAVFQCNASNQYGYILANAFLAVID
MKPRLLGLRDDLVKVIEGTRTLLHCPYFGSPKPDLRWSKGGMGLLEGSRYGILPNGTLEI
KRTKLQDQGTYLCVASNIIGRDEMELQLEVKEPTKIIRAPHNVIVVKGNLAEFDCKIQSD
PSLEVKVTWLKDNKFLIFGRRMTRDEDSMSIADVYRRDEGVYTCRVKTELEEVNASAKLT
VMDRPDPPTDLEVSDPSERSARLTWVPGLSNHNSIKEYLVQYTEDLLADYWLVQSGWKNL
TSYPGHLNSVVLQLRPFVEYQFRVIAINGLGPSKPSKPSEYYETGGAVPDAIPRNIKGVG
TGVFRNNMEISWEPLEYREWNGPKLGYMVWWRRRDSREEWKNYTTYWWCSHIIYETDTFT
PYEIKVQAVNYFGLGPESSVIIGYSGEDRPTAAPADLHVSDVESTKLTVYWQPVPQASIM
GEIKEYTVYYWRESSRLPHHSVTTRIKSKSFKANGPRLSGTLSGLIPYSNYKMYIVVANN
RFEGPPSNRIEFQTLEGVPSVPRSFRIMHKHYDTIYLDWEEPAEPNGILTGYILRYQTLN
VSAGERMLEEEIPPNTTHFSLRRFDRYTRYKFSLAAQTQVGMGEAFTEESPHFTTEEYSR
EQVDIITQGWFIGLMCAIALLVLIMLTVFFIKRTRGGKYPVRDKRGFGLDSVDEREEGSF
EYRITRAPTLPYSRREEESRQGRSQGHMQKKTNSDDSLMEYTEGDEIEFNEDGSFIGEYT
GTSKRDRDTFA
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgaaagtttgtggaagattgtggctgcatttatactcttgttacggatatgg
aaagaggtatctgcgttagaaatcccagctgatgtgagacagcctcctatcataattaag
cagagcatccaagatcacatagtggagccaacagatccaatcatagtcgagtgtgaggcc
acagggaatcctcctccagtttttacttggacacgcaatggagtgtaccttaatgttgca
cgtgaccctcaggttaccatgaagaggcgctctggaacacttgagatatttttttgggga
cgtccagatgattatgagggcgtgtaccaatgcactgctactaatgagtttgggtcagct
ctatccagccacattaatttacgtgtctccaaggctcgtacatggctgaaggagtattta
gaaccggtgtctgtgtttgtgggtcttcctttgattctgtcctgtaatcctccagtgggt
ccacccagacctcagacctactggatgaacagctctatggtaccaattcgtcaggatcgt
agagtatcaatggcagagaatggagatttgatgttctccagcgttatagctgaagatggg
ctaacaaactatgtgtgcacagctcgtttccccaactccaacatcatccatcagaaacct
ccattaattcttcaggtgcacacagctcgtatggcagctcaaaaccttcccaagttcttg
aagcccaaaggaacagccagcagtcagattgcaatgctaggagaggagcttatcttggaa
tgtttcgcttctggcgttccagctcccaccattaaatggtctaaagattgggggagctta
tccatggaaggcatgaagctggaaaactttaataaaacactgcgcatcaaaaagatttct
atggatgatggagggagctacatctgcactgccaccaacaagatgggcagcatggaccat
acaatcacagttaaagttaaatcaaccccattttgggtgaggaaaccagagaaccttatt
ctctctcgagatgacagtgggcagattgtgtgtcaagctgatggaattcccagacctcag
atacagtggctagttaatggagaacctattgaggatgctcctaaaaagcctggaagacaa
gtatcaggtgatactttgatatttcgtgccgtggtgcctgacagcacagctgtgttccag
tgtaatgcctctaaccaatatggctacatcctggccaatgcctttcttgcagtaattgat
atgaagccacgattgcttggtcttagagatgacttggttaaggtaattgaaggaactcgg
acacttctgcactgcccatattttggatcaccaaaacctgacttgcgctggtccaaaggt
ggaatgggtttattagaaggaagtagatatggaattcttcctaatggaacactagaaata
aagcgtaccaagctccaagaccaggggacatatctgtgtgttgctagcaacatcattgga
cgagacgaaatggagctacaactggaggttaaagaacccactaaaatcatccgtgccccg
cataatgtcattgtggtgaaagggaacttggctgaatttgactgtaagatccaatctgac
ccaagcttggaggtaaaggtcacctggctcaaggacaacaaattcctgatttttggaaga
cgaatgacaagggatgaggactctatgagcattgccgatgtatatagaagagatgagggt
gtttacacctgcagagttaagaccgagttggaggaagtcaatgcatcagcaaaactcact
gtgatggatcgtcctgacccacctactgacctggaggtgtcagatccatctgaacgaagt
gcaagactcacctgggtaccaggactgagcaaccacaactctatcaaagaatatctggtg
cagtacacagaggacctgcttgctgattattggctggtgcagagtggctggaagaacctg
accagttaccctggccacctgaactctgttgtgttgcagctgagaccctttgttgagtac
cagttccgggttattgctatcaatgggctcggccccagcaaacccagcaagccatctgag
tattacgagactggtggagctgttcctgatgccatcccacgaaacatcaaaggagtgggg
actggagtgttcagaaataatatggagatcagctgggagccattggagtatagagagtgg
aatgggcctaagctcggctacatggtgtggtggagaagaagagattccagagaggagtgg
aaaaactacaccacctactggtggtgtagtcacatcatctacgaaactgacaccttcaca
ccctatgagattaaagtacaggctgtcaattactttggcttaggaccagaatcttctgtg
atcattggatactcaggggaggatcgtcccactgctgctccagctgacctgcatgtctca
gatgtcgaaagcacaaaactgacagtctactggcagcctgttccccaagccagcatcatg
ggggagattaaagagtacacggtatactactggcgagaaagcagccgtctgccccatcac
agcgtcaccacaaggatcaaatccaagagctttaaagcaaatggacctcgactttcaggc
accctgtctggtctcattccttacagcaattacaagatgtacatagtagtagccaacaac
cgttttgagggtcctccaagcaacaggattgagttccagacccttgagggagtgccatca
gtacccaggtccttcaggatcatgcataagcattatgacaccatctatctagactgggag
gaacctgcagaacccaatggcatcctgactggatacatcctcagatatcagacattgaac
gtgtcagcaggagagcggatgctggaagaggaaatccctcccaacaccacgcacttttcg
ttgcgtcgctttgaccgatacacccgctacaagtttagtctggctgctcagacgcaggtg
ggaatgggagaagcattcacagaggagtcgccccatttcacaacagaggaatatagccgg
gaacaagtggatataatcacacagggatggttcatcgggttgatgtgtgctattgcactt
ttggttctcatcatgctcacagtcttcttcattaaaagaacacgtggaggaaagtaccca
gtgagagacaaacggggttttggacttgattctgtggatgaaagggaagaggggtctttt
gaatacaggataacgcgtgcacccaccctaccatactccaggcgggaggaggaaagccgc
cagggtcggagtcagggacacatgcagaaaaagacaaacagtgatgacagcctgatggaa
tatactgaaggtgatgagatcgagttcaatgaagatggctctttcattggtgaatatact
ggcaccagtaagagagacagagacacttttgcataa
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