Clarias gariepinus (North African catfish): 128510772
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Entry
128510772 CDS
T10780
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
128510772 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128510772 (mlh3)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
128510772 (mlh3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
MutL_C
DNA_mis_repair
HATPase_c
WW
Motif
Other DBs
NCBI-GeneID:
128510772
NCBI-ProteinID:
XP_053339254
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Position
22:complement(22818607..22827876)
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AA seq
1128 aa
AA seq
DB search
MIRSLPKEVQSLLRSGVAVFLLQQCVEELLLNSIDAGATCVAVKIDIDACKIQVIDNGSG
MDRENMERVGTRYCTSKCSSIHDLNNLCFYGYRGEAIASMATMATLVEITSRPKMSVKTF
VKSFHEGEASDVTEAQTTRPSAGTTVLISNFFHNMPVRRKRMDSVLEVERVRQRVEAISL
MHPSVSFTVKKDCSDTLLVQLPKARNTYYRFVQIHGLNRAQKLREVNYRYGQFEMTGHVG
REGHYNSSLQFLFVNGRLLLKTRLHKLLGCLLRRLSSVQTSSPNFSAVMSSPKQKGGADL
HGAYIINIKCPYSEYDVCLEPAKTLIEFKDWDSVLLCIEEGIKVFLTKENLISECAMSDV
QNLENEESVPGPNVSTEDKTDVEQHDELPEPGLANTKSKTNSYSDPEKEAVDADAGKDLP
GKVPENNQNAQCTDRNDDTSALCVSSNKLTHCENSKIAIVDHKAAYDSLSKLAEPSFSGA
PKRKLTLRQAGNPSDGCDYGPKIARVTPRHKLTLSFETGSLDKFKRMFGKEAEIKPQTQI
SDILCPTDSFDHSGLCSSSNLDCSDTMLVKDISVDRSLFKEKSVFQESQFSRNRISLATK
LSRKVEHKDMHANATLFNPVPQDTGSIETFPSFLSVVMNNDAFSKNSVVTTELHEREDDR
SDEPTFTAPEGQEKSTSTSTSTTEDTELTENTTSLEPDMPQGQIVDLASQHDLSPCKKTG
NEEQTANESRGHEIVQTEPVQSDWLTHYDDSLGKLFYINQVTGLSKYENPSLNDTQVPCS
TNLTNIAVSVVSKRGFEYRCYPFQTDLILPFLPKPRAERVHSTSIECGGPTSLSTLYSEW
NNPVFVRPPQVAVDVTSCQAEGLAVKIHNIIFPYRFTKEMIHSMKVIHQVDKKFLACLIN
TTESSENEENLLVLVDQHAAHERVRLEALVNESYEDDSDTPGKKRLCASRVSPPLEIHMT
EEEIRLLRLYQLSLRDLALEISFPQTEQSYVLVEKLPACFVEKENTEKRRGRRSVIKSIT
EEYIREHIEAVQSTGRVKATLPLTVHNVLASQACHGAIKFNDELNKEECCSLVASLSSCQ
LPFQCAHGRPSILPLADLLHLEEEKDVPKPNLRKLRRMYKAWQLYDKN
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgatcagaagtctgccgaaagaagttcaatcactgttgcgctccggagtcgccgttttt
ttgttgcagcaatgcgtggaagagcttctgctgaacagcatagatgctggagcaacatgt
gtggccgtgaagatagacatagacgcctgcaaaattcaggtcatagacaacggctcaggc
atggaccgggagaacatggaaagggttgggaccaggtattgcacaagcaaatgcagttct
attcatgatttgaataacctttgcttctatgggtacagaggagaagcgattgccagcatg
gccaccatggcaactctggtggaaatcacctcaagacccaagatgtctgtgaaaacgttt
gttaaaagctttcacgaaggtgaggcgtcggatgtgactgaggcacagaccactcgccct
tcggctgggacaactgtgcttattagtaacttctttcacaacatgccggtcaggagaaaa
aggatggactctgtgctggaggttgagcgcgttcgacagagagtcgaggccatatcgctg
atgcatccgtctgtgtcgtttactgtcaaaaaagattgttcagacactcttctggtacag
cttcccaaagccaggaatacttactacagatttgtacagatacacggactgaatagagcc
caaaagctcagagaggtaaattacaggtatggacagtttgaaatgactgggcacgttggc
cgagagggacactacaacagcagtctgcagttcctctttgtgaatgggcgacttctcctt
aaaacacgtcttcacaaactactcggctgtctcctcagacgactgagtagtgtccaaacc
agcagtccgaacttctcagctgttatgtcaagtcctaaacaaaaaggcggtgctgattta
cacggagcttacatcattaacatcaagtgtccctattcggagtatgacgtatgcctggag
ccagcgaagacccttatagagttcaaagactgggatagtgttctcttgtgcatcgaggaa
ggaataaaagtattccttacaaaggagaacttgatatcagagtgtgctatgagtgacgta
caaaacctggagaatgaggaaagtgttccaggaccaaatgtaagcactgaagacaagaca
gacgtggaacaacatgatgagttacctgaaccagggctagcaaatacaaagtcaaaaaca
aattcgtattcagatcctgaaaaagaagccgtagacgccgatgctggtaaagatctaccc
gggaaagttcctgaaaataatcaaaacgcacagtgcactgataggaacgacgacacttcg
gcactttgtgtaagcagcaataaattgacacattgtgaaaattccaagattgctatcgtc
gaccataaagcggcctacgacagtttgagcaaacttgctgaaccgagttttagcggtgcg
ccgaagagaaagctgacattacgtcaagctgggaatccttcagacggctgtgactacggg
ccaaagatcgccagggtcacgccccgtcacaaattaacactctcttttgaaacaggatcg
cttgacaaattcaaaaggatgtttggaaaggaggctgaaattaaacctcaaacacaaatc
tctgacattttatgtccgacagattcttttgaccattctggtttgtgctcaagcagtaat
ttagactgttccgacactatgctggtaaaagatattagtgtagatcgctctttattcaag
gagaagtctgtcttccaggagtctcagttttccaggaacaggatatcattagcaacaaag
ctgtctcgcaaggttgaacacaaagatatgcatgccaatgccacattgtttaaccctgta
ccacaagatacaggctctatagagacatttcccagttttctatcagtggtaatgaacaat
gacgctttttcaaagaactccgtcgttacaactgagctgcatgagcgtgaggatgaccgt
tcagatgaacccacattcactgctcccgaaggacaagaaaagtcaacaagcacctctacc
tccactacagaagacactgagctcaccgaaaatacgacttcccttgagcccgatatgcca
caaggtcaaatagttgacctcgcatcacaacatgacctatcgccctgtaaaaaaacagga
aatgaagaacagaccgcaaatgaaagccggggccacgagattgttcagacggagcctgta
cagagtgattggctgacacattacgacgattcattgggaaagttgttctacatcaatcaa
gtcacaggactcagtaaatatgagaatccatcactgaatgacactcaagtaccgtgctct
acgaacctcactaacatagcagtcagtgttgtttcaaagagaggatttgagtacagatgc
tacccttttcagacagaccttatattgccctttcttcccaaacctagagcagagagagtc
catagcacaagcatagaatgtggaggtcctacttccctctcgactctttactctgagtgg
aataaccctgtctttgtacgaccacctcaggttgccgttgatgtgacaagttgccaagcc
gaaggccttgctgtaaaaatccataacattatcttcccctatcgcttcactaaggaaatg
atccactcaatgaaggtcattcatcaagtagacaagaaatttcttgcctgtctcatcaat
accacagagtccagtgaaaatgaggaaaaccttcttgtactcgttgatcaacatgcagct
cacgaaagggttcgcttagaggcgcttgtaaacgagtcttatgaggatgactcggacaca
ccaggtaaaaaaagactctgtgcatcgcgtgtaagtcctcccctggagatccatatgact
gaagaagagatcagactgctgaggttgtatcagctttcactaagagaccttgctctagaa
ataagctttcctcagacagaacagtcgtatgtgcttgtggagaaactcccagcgtgtttt
gtagagaaagagaacacagaaaagcgacgtggccgacgaagtgtaatcaagtctattaca
gaggaatacataagagagcacattgaggctgtgcagtcgacaggaagagtaaaagccact
ttgcctttaacagtccacaatgtccttgcttcacaagcatgtcatggagcaattaagttt
aatgatgagctgaataaagaggagtgctgcagtctggtggcgtccctctcgtcctgtcag
ctgcctttccagtgtgctcatggacggccctccattcttcctctagccgatcttctccac
ttagaggaggaaaaggacgttcccaaacccaatctcagaaaattgagaagaatgtacaag
gcatggcaactttatgacaagaattga
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