Clarias gariepinus (North African catfish): 128510887
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Entry
128510887 CDS
T10780
Symbol
l1cama
Name
(RefSeq) neural cell adhesion molecule L1.2 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128510887 (l1cama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgar04515
]
128510887 (l1cama)
04090 CD molecules [BR:
cgar04090
]
128510887 (l1cama)
04091 Lectins [BR:
cgar04091
]
128510887 (l1cama)
Cell adhesion molecules [BR:
cgar04515
]
Immunoglobulin superfamily
L1 family
128510887 (l1cama)
CD molecules [BR:
cgar04090
]
Proteins
128510887 (l1cama)
Lectins [BR:
cgar04091
]
I-type lectins (Siglecs)
128510887 (l1cama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Ig_J
Motif
Other DBs
NCBI-GeneID:
128510887
NCBI-ProteinID:
XP_053339414
LinkDB
All DBs
Position
22:complement(6262477..6322801)
Genome browser
AA seq
1280 aa
AA seq
DB search
MPTTLLQQAGSRGRHLIHPLPLLRALFLLVLAAMPGQTAIHIPENYHIKELKTPPQITAQ
PESIIAFNSDDITLKCEATGKPSPTFRWVKDGLAFDPSSIPGVTTSFYSGSFTVKDAAIH
QFHGNYSCLASNDLGTAVSNEAHVITEDTPTIQREKKEGEKKVEEGNPVILQCNPPQTSA
TPLIHWMDKRLRHIQQSERVTQGRDGNLYFSHVTIEDSRNDYTCNVQFLGARIIVAKEPI
SLKVTPSNTLRNRRPQMMRPTGSHSSYLVLRGQPLELECIVQGMPTPSIQWVRKDGVLSE
SRTSRENFDRLLRFTNIYEQDDGEYQCTANNSQGTITHTYTVSVEAAPYWIKEPESELYA
PGETVKLECQADGIPTPEVTWSMNGNPLSDIDPDPRRTVKGGTLILKDVKIIDTAVYQCK
ASNKHGTILINTHVFVTVLPPQILTEDSLLYRVTEGMTAKLQCLTFGSPRPKITWEGETW
DSVMSNSRLNQLINGTLEISNVFQNDTGIYTCSVGEDKLAITAELEVLNRTVIVNPPEAL
YIQKGKRAMFTCQYQIDSNLGTPQILWRKANKKLDESYDVDKYIIDETELIVNDVQDEDE
GVYGCEVITSLDIAEATGSLTVVDRPEPPSMLQITEPGTHSVTLLWVPGDNHKSPILEYV
VEAEETGTDTEEWEELMRVAGDTRRTTLPLKPFLSYRFRVIAINKIGKSNPSQPSAAYST
PAARPSGNPEGVRSESLDPGTLVITWKEMDRRSFNGPKFQYKVMWRKVVGSGPSWHSNFT
ESPPLVVMDVGNFSAFDIKVQAVNELGEGPEPISTIGYSGEDEPLESPLNVGVLLLNSTA
IRVTWPEVESDTVRGHLMGYKIHLGYCGSCGKHTHHHQPSNPEECEPVNEVVVTTGPKEQ
KKDLGGLRPYSSYSVAVSVFNSKGDGPKSEASTFHMPEGVPGPPTSLTLSSPSETEMTLH
WTPPAQENGILTGYVLQYQELDNMDSPMQVESIDDPTVHELSIKDLDRRSHYRFHLRGRT
AAGQGLPIAKVGATTLDGAPPRDISLSVGETAVNLSWVSPERQRNVGFHIHYLKKNGHGR
WMQSEKVNTSQSFYSLQGLQPGSHYSLRFVFSNKTFWETDIQTGGAAVKEKQSSFATEGW
FIGLISALVLLLLLLLILCFVKRNKGGKYSVKDKEEGQVDSESRPMKDETFGEYRSLESD
NEEKRTASQPSLCEDSKLCSDDGLDDYGSHSAHTKVTMDESLASQYSGVRDGLEIERHDG
SPLKPGVTNHGLPNSAAVLD
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgcctactacactactacagcaggctggcagcagggggcgccacctaattcacccgctc
ccgctcctccgcgcccttttccttctggtgctcgcagctatgccaggccagactgccatt
catattccagaaaactaccacattaaagaactaaagacgcccccacaaattactgcccaa
cctgaatccatcattgccttcaactctgatgacatcacgctcaagtgtgaggcgactggg
aagccctctcccacatttcgatgggttaaagatggattggcgtttgacccatcaagcatc
cctggtgtcaccacgtctttttattctgggagttttacggttaaagatgcagccattcac
cagttccacggcaactacagctgtctggcctccaacgatctgggcacagccgtctccaac
gaggcccacgtcatcaccgaggatactcccacaatacagcgggagaagaaagaaggcgag
aagaaggtagaagaaggaaatcctgttattttacagtgcaaccctccacaaacttctgcg
acccctttgattcactggatggataagaggcttcggcacatccagcagagcgagcgtgtg
actcagggccgtgatggaaacctctacttctcccatgtgaccattgaggacagcagaaat
gattacacctgcaacgtgcagtttctgggagctcgcatcattgtagccaaagaacccatt
agcctgaaggtcacaccatctaacacccttcgaaacagacggccacagatgatgagacct
acaggctctcacagctcatatttggtcctgagaggccaacccctcgaactggagtgtatc
gtccagggcatgcccactccatccatccagtgggtgaggaaggacggagtgctgtccgag
tctcgtacgtccagagagaacttcgatcggctgctgcgttttaccaacatctacgagcag
gatgatggggagtaccagtgcacagccaacaactcccagggcaccatcacacacacttat
accgtctccgtggaagctgctccgtactggataaaggaaccggagagtgaactttacgcc
ccgggggagacagtcaaattggaatgtcaggcagatgggatcccaaccccagaggtcacc
tggagtatgaatggaaaccctctctcagatatagacccggacccacggcgtacagtgaaa
ggagggactctcatcctgaaggacgtgaagatcattgacactgcagtgtaccagtgcaag
gcttctaacaaacacggaacaatcctcatcaacacccacgtcttcgtcactgtgcttcct
ccacagatcctgacagaggattcattgttgtacagagtgacagagggaatgacggccaag
ttgcagtgcctgacctttggttcgcctcgtccgaaaatcacatgggagggtgaaacctgg
gactctgtgatgtccaactccaggctgaatcagctaatcaatggtactctggagattagc
aatgttttccaaaacgatacaggcatctacacctgctcagtgggtgaagacaaactcgcc
atcactgccgagctggaagtcctcaaccggacagtgattgtgaatccacccgaggctctg
tatattcagaagggaaagagggccatgttcacctgtcagtaccagatagacagcaatctg
ggaacacctcagatcctgtggagaaaagcaaacaagaagcttgatgagtcctatgatgtg
gacaagtacataattgatgagacagagcttatagtaaatgacgtccaggatgaagacgaa
ggtgtttatggttgtgaggtcataacaagtttggacatagcagaagcaaccggcagcctc
acggttgttgatcgaccagagcctccgtccatgctgcagatcactgaacctggaacgcac
tcagtaactctgctatgggttcctggggataaccacaaaagccctattttagagtatgtg
gtggaagctgaagagactggcactgatacggaggagtgggaggagctcatgcgggtagct
ggagacactcgtcgcaccacgctcccactcaaacccttcctgtcataccgcttccgggtc
atcgccatcaataagatcggcaagagtaaccccagccagccctccgcagcgtactccact
cctgcagctcgaccgagtggtaaccctgaaggagtgcgtagtgagtccctcgacccaggc
acacttgtcatcacgtggaaggagatggatagaaggagcttcaatggcccaaagttccaa
tacaaagtgatgtggaggaaggttgttggcagtgggccatcttggcattcaaattttaca
gaatcgccaccccttgttgtcatggatgtgggtaatttcagcgcgtttgacatcaaggtg
caggctgttaatgaactgggagagggtccagaacccatatctacaattggctactctgga
gaggacgaacctttggaatcgcctctgaatgtaggagtgcttctactcaacagcactgcc
atcagggtaacatggcccgaggtggagagcgacacagtgagaggacatctgatgggctac
aagatccacctgggatactgtggctcctgtggaaaacatacacaccatcatcaaccgtcc
aaccccgaggaatgcgaaccagtgaatgaggttgtagtgacaacaggacctaaagagcag
aaaaaggatctgggtggcctgcggccgtattcctcatattccgtcgctgttagcgtcttc
aacagcaaaggagatggacccaagtcagaagcttcgaccttccacatgcctgaaggagtt
cctggtcctccaacatcgttgacattgtccagtccttcggagacggaaatgacgctccac
tggactccacctgctcaagaaaatggaattctgaccggatacgtattacaataccaagag
ctagacaacatggacagccccatgcaggtggagtcgattgatgatcccacagtgcatgag
ctaagcattaaagatctggaccgtcgcagccattaccgttttcacctgcgggggcgcact
gcagccggacaaggcctgccaatcgccaaagtcggggcgaccacacttgatggagctcca
ccccgtgacattagtttgtctgttggagagacagctgttaatctgagctgggtgtcccct
gagagacaaaggaacgtagggttccatattcactacctgaagaagaacggccatgggaga
tggatgcagtcagagaaagtgaacacgtctcagtccttttactccctgcagggcctccag
cctggatctcattacagtttgcgcttcgtcttcagcaacaagaccttctgggaaactgac
atacagacaggaggagcagcagtgaaggagaagcagagcagctttgctactgaaggctgg
tttatcggcctcatcagcgccctcgtgctgttgttgctgcttctgctcattctctgcttt
gtcaaacgcaacaaaggtggaaagtactcagtgaaagacaaggaggagggccaggtggac
tctgagtctcgaccgatgaaggacgagacgttcggggagtacagatcactagagagtgac
aacgaggagaagcgtacggctagtcagccgtctctgtgcgaggacagcaagctgtgtagc
gacgacggtttggacgattacggcagtcacagcgctcacaccaaggtgaccatggacgag
tccctagccagtcagtacagcggagtcagagacgggctggagatcgagaggcatgacgga
tcgcccctcaaacccggcgtcaccaaccacggcctgcccaactctgctgccgtcctcgac
tag
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integrated database retrieval system
