Clarias gariepinus (North African catfish): 128510968
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Entry
128510968 CDS
T10780
Symbol
poc1a
Name
(RefSeq) POC1 centriolar protein homolog A isoform X1
KO
K16482
centriolar protein POC1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128510968 (poc1a)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgar03037
]
128510968 (poc1a)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
128510968 (poc1a)
Cilium and associated proteins [BR:
cgar03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128510968 (poc1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_Aladin
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_WDR41
DSE1_N
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_NOL10_N
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_SCAP
Ge1_WD40
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_HPS5
ASA1
eIF2A
Beta-prop_Nup120_160
PAC11
Beta-prop_NWD2_C
BCAS3_WD40
Tricorn_2nd
Beta-prop_WDR75_2nd
PROPPIN
Beta-prop_IP5PC_F
Beta-prop_ACSF4
WDR54
Motif
Other DBs
NCBI-GeneID:
128510968
NCBI-ProteinID:
XP_053339504
LinkDB
All DBs
Position
23
Genome browser
AA seq
427 aa
AA seq
DB search
MSYTQEDPTLERSLKGHRDAISSVTFNPNSRQTATGSLDSCVMVWNMKPQGKSYRFVGHK
DGVTCVHFSPSGQLLASASRDCTVRLWLPTKSGESSVFKAHTGTVRSVNFCSDGQTLVTA
SDDKTVKVWTVHRQKFLFSFNRHINWVRCAKFSPDGRLIVSASDDKTVKLWDKNSRECVH
SFCEHSGYVNYADFHPSGTCVAAACTDNTVKVWDIRTHKLLQHYQVHSGAVNCLSFHPAG
NHLITASTDSTLKILDLLEGRLSYTLHGHQGPALCVAFSRTGDHFASGGSDEQVMVWKAN
LDAASQRDILKTEKRPSAPVQASDILDMSHCRSSLSSQSSQRLDDCPVSAHTATDQSHRS
VLSVLDTPFCPTVTSTLQHIVGQLDILTQTVAILEQRLTLTENKLKECVENQHKINLQFQ
NKTHSNF
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagctacacacaggaggatcccacactggaaaggagccttaaaggtcacagagatgcc
ataagtagtgtgacctttaacccaaacagcagacagacagccacgggctcgttggactcg
tgtgtgatggtatggaacatgaagccccaggggaagtcgtatcggtttgttggacataag
gatggtgtgacgtgtgtgcacttctctccgtcaggacagctcctcgcctcggcctcgcgt
gactgcaccgtccgcctctggctgcccaccaagagtggcgagtcgagtgtgtttaaagct
cacacagggacggtgcggagtgtgaacttctgcagcgatggacagacactggttactgca
tcagatgataaaacagtcaaggtgtggacggtccatcggcagaaattcctcttctccttc
aacagacacatcaactgggttcgctgtgccaaattttccccagacggcaggttaatcgtc
tccgcaagcgacgacaagacggtgaagctctgggacaagaacagccgagaatgcgtacac
tccttctgtgagcacagcgggtacgtgaactacgctgatttccaccccagtgggacatgt
gtcgccgccgcctgcacagacaacacggtgaaggtgtgggacatccgcactcacaaactc
ctgcagcattaccaagttcacagtggagcagtcaactgtctgtccttccacccggccggt
aatcacctgatcaccgcctccaccgactctacactcaaaatccttgatctcctggagggc
cggctgtcatatacgttgcacggacaccaggggccggcgctctgtgtagcgttttcaaga
actggagatcactttgcctctggaggctctgatgaacaggtgatggtatggaaggcaaat
ttggatgctgcaagtcagagggacatcctaaagacggagaaaagaccgagtgctcctgta
caggcttcagacatcttggatatgtctcactgccgctccagtctaagctctcaatcatct
cagagactagatgattgccctgtctctgcccacactgcgacggaccaatcacatcgctct
gtcctgtctgtgttggacacacccttctgtcccacagtcacctcaacactgcagcacata
gtgggtcagctcgacatcctcacacagacggtggccatactggaacagagactgactctg
acggagaacaaactgaaggagtgtgtggagaaccagcacaaaatcaacctgcagtttcag
aacaaaactcactctaatttctaa
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