Clarias gariepinus (North African catfish): 128510980
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Entry
128510980 CDS
T10780
Symbol
zbtb40
Name
(RefSeq) zinc finger and BTB domain-containing protein 40 isoform X1
KO
K10512
zinc finger and BTB domain-containing protein 40
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128510980 (zbtb40)
04121 Ubiquitin system [BR:
cgar04121
]
128510980 (zbtb40)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
128510980 (zbtb40)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
128510980 (zbtb40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_jaz
Zf-C2H2_ZNF451_C
zf-C2H2_6
E7
zf-C2H2_15
zf-C2H2_8
zf-met
zf-C2H2_11
Zap1_zf1
zf-C2H2_7th_ZNF462
Zn_ribbon_8
zf_C2H2_ZHX
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
128510980
NCBI-ProteinID:
XP_053339536
LinkDB
All DBs
Position
23:23119436..23130162
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AA seq
1087 aa
AA seq
DB search
MMELLNYSRQLMQQLQTLRKDSQFCDCTILVGDASYPAHKVVLAASSLLFKSLLESSDSI
SIDTTVVTPQEFSSLLDTAYLGRLVPGKHDLARVIAAADSLQMFDVAVCCKNILDELVKR
CEPDAEGVNEFCQRRQHDSFDKVTSPGNCVESQNGDGAVELLIHKQDVLMRTLQNIQPWI
NILRTWGTLSSQQQHMLLECFEGDPGVDAVYQRLLDQVKNGHGTLSVHTVVMKLEQINSL
KPDSESAGMEEKKETGPELKVTEGSVVEVARSSGYQRDLVSELSVYLTGVENISELLART
ADRCKIEDVKQILLECSREQDDGPVLRKLLSMLTDRGVDETSVLLLLKEADICLTPGKRK
DEHVAVSLLRTFQDRLSALNLGELLIRRSLEEGPGISSDQREVLQIAADGKIEKLLRAAL
EGDTLQPLTVWRLLFWAATHSPELQLITQEIRSKPDAQELIHMVARVDALFKHKKLILET
INEIPDLERAAGDVEGDKDVTEQNQLCQFLQSCRGVDGQAESMEQVMDRVLSRETRYVRP
LCLLLCMSQESFPDLSVLIKELSHVEVDPDEEAAVSEKEEEEEEKDEERTHRRRKGVIVS
YSCPWCNKSFDFKCRLLKHKKQCALCPERAQCCGECSVVFPSVTALQQHRAEAHDGPPAK
RKKVEPVTCELCGKVFKHPSGLLYHRRTEHLEERPYACEECGSKFAANSSLKNHMRLHTG
EKPYCCKHCDMSFAVAAALSYHTKKKHSEGKMYSCQYCSATFAQSIELTRHVRTHTGDKP
YVCRECGKGFKQANGLSMHLQTFHNISDPHDCQKCRVSFSCLEKLREHIQEVHPKELHQC
PECNKILNTAAQLEKHMSVHDGSKPYSCQSCRKSYQTLSGLWYHNRTTHPDAATTEGGRS
VSHLLRCKICNKTFCNRSSLFKHNITKHPETRAVTDEDEKDAQADAPAWRCVYCPSALSS
EQELQQHVSSEHVNLQGSVFACAVCSLSFLSDAEFQQHFLSNHVQLLQEEGLQGHVSTPQ
MVIQTEDGSAEGAAQIVRLDQSQLAGSQQVFVALGDSGETADDSGIVAVNVEDLLAGRVT
LICEENQ
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctcctgaactacagtcgacagctcatgcaacagcttcagacattgcgaaaa
gactcccagttctgcgactgcaccatcctggtcggggacgcatcctatccggcgcacaaa
gtggtcctggccgcttccagcctgctcttcaagtctcttcttgagtcttcagacagcatc
tctattgacacgactgtggtcacgccgcaggagttctcctccctgctggatacggcctac
ctgggcagactggtgccgggcaaacacgacctcgcacgtgtcatcgccgctgcagacagc
ctgcagatgttcgacgtggctgtgtgctgcaagaacatcctggacgagcttgtgaagcgg
tgtgaaccagatgctgaaggtgtaaacgagttttgtcaaagaaggcaacatgattctttt
gacaaagtgacgagtccgggaaactgtgtggagtctcaaaatggagatggtgctgtggag
ttgcttattcacaaacaggacgttctcatgaggaccctgcagaacatccagccttggatt
aacattcttcgcacctggggtacactgtcaagtcagcaacaacatatgttgctggagtgt
tttgaaggagatccaggtgtggatgctgtttaccagcgcctcttggaccaggtaaagaat
ggacacggcacgctgtcagtccacactgttgttatgaagttggagcaaattaacagctta
aagcctgattcagagtcagcagggatggaagaaaagaaggagacaggacctgaactcaaa
gtcacagagggatctgttgtggaggttgccagatcttctggatatcagcgtgacctggtt
tcagagctgagtgtttacctcacaggtgtggagaacatctcggaactgctcgctcggaca
gcagacagatgcaagatcgaagacgtgaagcagattcttctggagtgcagtagagagcag
gatgatggaccggtgctgaggaagctgctgagcatgctcaccgacagaggagtagacgaa
acatctgtactgctgctgctaaaggaggcggatatttgtcttactccaggtaagaggaag
gatgagcacgttgccgtgtcgctgttgagaacgttccaggacagactgagcgcactgaac
ctcggggagttgctcatcaggcggagtttggaggaagggcctggcatctcgtctgaccag
agagaggttctgcagatagcggctgacggtaaaatagagaagctgctcagagctgctctg
gaaggagatacgcttcagcctctgacggtatggaggctcctgttctgggccgcgactcac
agcccagagctccaactcatcacacaggaaatccggtcaaaaccagacgctcaggagctc
atacacatggttgcccgagtggatgccttgttcaagcacaaaaagctcattctggaaaca
atcaatgaaatccctgacctggaaagagctgcaggcgatgtggagggcgataaagacgtc
actgagcaaaatcaattgtgtcagttcctgcagagctgccgtggtgttgacggacaagcg
gagtctatggagcaggttatggaccgagtactgagcagagagacgcggtacgtccggcca
ctttgtctcctcttgtgcatgagccaggagagcttccctgacctatccgtcctcatcaag
gagctcagccatgttgaagtggatcccgatgaagaggctgcagtgtcggagaaagaagaa
gaggaagaggagaaggatgaagaacgcacacacaggaggaggaagggcgtcatcgtgtcc
tacagctgcccgtggtgcaacaagtctttcgacttcaagtgtcgtctgctgaagcacaag
aagcagtgcgcgctctgtccggagagagcgcagtgctgcggcgagtgctccgtcgtcttc
ccgtcggtcaccgccctgcagcagcaccgagccgaggctcacgacggccctcctgctaag
aggaagaaagtagagccggtgacatgtgagctctgtggaaaggtttttaaacacccttct
ggtctgttgtaccacaggcgcacagagcatttggaggaaaggccctacgcgtgcgaggaa
tgtggctccaagttcgccgccaactcgtccctgaagaaccacatgcggctgcacacggga
gagaaaccgtactgctgcaaacactgtgacatgagcttcgccgtggccgccgcactgtcc
taccataccaagaagaaacactcggagggtaagatgtactcgtgtcagtactgctcggca
acgtttgcacagtctatcgagctgacgcggcacgtgcgcacacacacgggagacaaaccg
tacgtgtgtagggagtgtgggaaaggcttcaaacaggccaacgggctctcaatgcacctg
cagacctttcacaatatctcggacccgcatgactgtcagaagtgtcgcgtgagcttcagt
tgcctggagaagctccgtgagcacattcaggaggttcaccctaaagagctgcaccagtgt
cccgagtgcaacaagatcctgaacaccgcggctcagctggaaaaacacatgagtgtccat
gacggcagcaaaccctacagctgccagagctgccgcaaatcctaccagactctctcaggg
ctgtggtatcacaatcgcaccacacacccggacgcggcgacaacggagggcggccgctcg
gtttcacaccttctgcgctgtaagatctgcaacaagaccttctgcaacaggagcagcttg
ttcaaacacaacatcaccaaacaccctgaaacccgtgctgtgactgatgaagatgaaaag
gacgcacaggcagatgcccctgcgtggaggtgtgtgtactgtcctagtgctctgagtagc
gagcaggagctacagcagcacgtgtcgagcgagcacgtcaacctgcaaggctcggtgttc
gcctgcgctgtctgctcgctgtccttcctctcggatgcagaattccagcagcacttcctc
agcaaccacgtgcagcttctccaggaggaggggctacaggggcatgtctccacccctcaa
atggtgatccagacagaagacggctcagctgaaggggcggcacagatcgtcaggcttgac
caatcacagctggccggctcccaacaggtgttcgtcgccctgggcgacagcggcgagacg
gcagacgactcggggatcgtcgccgttaacgtggaggacttgctggcgggccgtgtcaca
ctgatctgtgaggagaaccaatag
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integrated database retrieval system
