Clarias gariepinus (North African catfish): 128511135
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Entry
128511135 CDS
T10780
Symbol
ppfia4
Name
(RefSeq) liprin-alpha-4
KO
K26226
liprin-alpha
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128511135 (ppfia4)
Membrane trafficking [BR:
cgar04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128511135 (ppfia4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
Dehydrin
Prefoldin_2
Motif
Other DBs
NCBI-GeneID:
128511135
NCBI-ProteinID:
XP_053339785
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All DBs
Position
23:complement(17365066..17499094)
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AA seq
1196 aa
AA seq
DB search
MMCEVMPTINEGDSTSSQRGSQNGSDGESNFEQLMVNMLDERDKLLESLRETRDALVQSQ
AKLQEALHERDALQRQISSALPQEFTSLTKELSGCREQLLEKEEEISELKAERNNTRLLL
EHLECLVSRHERSLRMTVVKRQAPPPSGVSSEVEVLKALKSLFEHHKALDEKVRERLRVA
LERVTTLEGQLTATSQELAMVRQGRDGKADGNKMDSSKPAWKRLPNGSIDVHDDSTRAVE
LQELLDKANKDLSTSRERANTLNTRVAELESELANVRKDLLKSEEFSAKHQRDIREAMAQ
KEDMEERITTLEKRYLAAQRETTSIHDLNDKLENELATKDSLHRQSEEKVRHLQELLELA
EQRLQQTMRKAETLPEVEAELAQRVAALTKAKERHGNIEERLRQLESQLEEKNQELSRAR
QREKMNEEHNRRLSDTVDRLLTESNERLQLHLKERMAALEDKNALIQDLENSQKQLEEFH
HTKERLIGEIDKLRTELDHLKRRSGAFGDGTHPRSHLGSATDLRFSVVEGQGEHFSSTGV
IRRTQKGRMVALRDEPTKDWERLQPSSLRGSRSHLMGSDTELSELDDDDRETVFSSGDML
SPSGHSDAQTLALMLQEQLDAINEEIRMIQVERESAELRADEIESRVNSGSMDGLNVTLR
PRSTIPTSVTALSLASSSPPVSGRSTPKMASRSTAHELGVMTLPSDLRKHRRKVTSPVEA
REDKATIKCEMSPPSSPRSLKLDQINFAQLTGSLEDGRGGNKKKGIKSSIGRLFGKKDKP
QPMTKDGQMTPPVIPDFEMSIGDTMTLGKQAERDRRMKKKHELLEDARRKGLPFAHWDGP
TVVSWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEM
VSLTSPSAPLTSRTSSGNVWVTHEEMENMATSSKAENEEGSWAQTLAYGDMNHEWIGNEW
LPSLGLPQYRSYFMECLVDARMLDHLTKKDLRTHLKMVDSFHRASLQYGIMCLKRLNYDR
KELDRRREQCHHDLKDTLVWTNEHVMNWVQTIGLKEYSNNLLESGVHGALIALDETFDFC
SLALILQIPMQNTQARQILEREFNNVLALGTDRRLEECDDKSFRRSPSWRKRFRPRDGQG
LGMMPGSIETLPAGFRLSTMSIPSSMSVNPKKQLQPEAGPQAPQRLDPSAIRTYSC
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgtgaagtgatgcccaccatcaacgagggagactcgacgagttcccagcgaggt
tctcagaatggctcggacggggagtccaatttcgagcagctgatggtaaacatgctggac
gagcgagacaagctgctggagtcgttacgcgagaccagagatgctcttgtacagtcacag
gccaagcttcaggaggcgcttcacgagagggatgctctccagagacagatcagctcagcg
ctgccacaggagtttacatcactaacaaaggagctgagtggatgtcgggagcagcttctg
gagaaagaggaagaaatctctgagcttaaagcagaaaggaacaacaccaggctcctcctg
gagcatttggagtgtttggtgtcacgtcacgagcgctctttgaggatgacagtggtgaag
cgacaggctcctccaccctcaggagtctccagcgaagtggaggtgctcaaggctctcaaa
tcactgtttgagcaccacaaagctctggatgaaaaggtgcgagagcgactgcgtgtggct
ctggagagagtgacaacactagagggccaactgacagccacaagtcaggagcttgccatg
gtgcgacagggaagagatggaaaggcagatgggaacaaaatggacagctctaaaccagcc
tggaagaggctgccaaatggctccatagatgtccatgatgattccactcgggctgtggag
ctgcaggaactgctagacaaagctaataaagatctgtcgacgagtcgtgagcgtgctaac
acgttgaatacccgcgtggctgagctcgagagcgaactcgccaatgtgcgcaaggacctg
ctgaaaagtgaggagttcagtgccaaacaccagcgagacatacgcgaggcgatggcacag
aaggaggacatggaggagaggatcacaacgctggagaagcgctacctggctgcccaacgt
gaaacaacctccatccatgacctaaatgacaagctggagaatgagctggccaccaaggac
tcgcttcatcgacagagcgaggagaaggtgcgtcatttgcaggagttgctggagctggct
gaacagaggctacagcagacgatgaggaaggccgagacactgccagaggtggaggctgaa
ctggctcagagagtggctgctctcaccaaggcaaaggaacgacacgggaacattgaagag
cgccttcggcaattagagtcacagctggaagagaagaaccaggagctgagccgggctcgt
caaagggagaaaatgaacgaggaacacaacaggcgtctgtcggatacagtggaccgcctg
ctcactgaatctaatgaacgcctgcagctccacttgaaagaacgaatggctgccctggag
gataagaatgccctcatccaggatctggagaattcacaaaaacagttagaagagtttcac
cataccaaggagagactgataggagaaattgacaagcttcgcacagagcttgatcatcta
aagagacggagcggagcttttggtgatgggacacaccctcggtctcatttgggtagtgcc
acagacctgcgtttttctgtggtggaaggacagggggagcacttttcctctactggagtc
attcggcggacacaaaaaggaagaatggtagcactcagggacgagcccacaaaggactgg
gagaggttacagccttctagccttcgaggcagccgctcacacctgatgggcagcgacaca
gagctctcggagctggacgacgatgaccgcgagaccgtgttcagttcaggggatatgctg
tctcctagtggccactcggacgcacagacacttgccctgatgttgcaggagcagttggat
gccatcaatgaggaaatcaggatgatccaggtcgagcgggaatcagcagagctccgggca
gacgagatcgagagccgtgtgaacagcggtagcatggatggactgaatgtgacactgcgc
ccaaggtctactatccccacttcggttactgccctctccctcgccagctcttcacctcct
gtcagtggacgctccactccaaagatggcatctcgctccactgctcatgagctgggtgtc
atgaccctgcctagtgatttacggaaacaccgcagaaaagtcacttctccagtggaagcg
cgtgaggataaggccactataaagtgtgaaatgtcgcccccttcctccccacgtagtctt
aaactcgatcagataaacttcgctcagctgactggaagccttgaagatggacgaggtggc
aacaaaaagaagggaatcaagtcctccatcggccgcttgtttggcaagaaggataagcct
caaccaatgaccaaagatggccagatgacaccacccgtaattcctgattttgagatgagt
attggagatactatgaccctgggcaagcaggctgagagagaccgcaggatgaagaagaaa
cacgagcttttggaagatgcacggaggaagggccttccgttcgctcattgggatggcccg
acggtggtctcttggcttgagctgtgggttggaatgccagcgtggtacgtagcggcttgc
cgtgccaatgtgaagagcggtgccatcatgtctgcgctatccgatacagagatccagagg
gaaatcggcataagcaacccattgcacaggcttaagctcagactggccatccaggagatg
gtgtcactcaccagtccctccgccccactcacttcacgcacctcctccggaaatgtctgg
gtgacgcacgaagagatggagaacatggcaacctcgtccaaagcagagaacgaggaaggg
agctgggcacagaccctggcatatggagacatgaaccacgaatggataggaaatgagtgg
ctgcctagtctgggtctgcctcagtaccgcagctacttcatggagtgtttggtggatgct
cgcatgctggaccacctcaccaagaaagatttgcgcacgcacctaaaaatggtggatagc
tttcacagggccagtttacagtacggcatcatgtgcttaaagaggcttaactatgacagg
aaggagctggatcgaagaagagagcagtgtcaccatgatctcaaagacactctggtgtgg
acaaatgagcatgtaatgaactgggtgcagaccatcggactaaaggagtatagcaataac
cttctggagagcggagtacatggtgccctcatcgccttggatgagacgttcgacttctgc
agcctggccctcatcctacaaattcccatgcagaacacacaggccaggcagatccttgag
cgggagtttaacaatgtcttggccttggggactgacaggcgtctagaggagtgtgatgat
aagtcttttcgccggtccccatcatggaggaaacgtttcagaccacgggatggccaaggc
ctgggcatgatgcccggctccattgagacactccccgctggctttcgcctctccaccatg
tccattccctcctccatgagtgtcaatcccaaaaaacagctgcagcccgaagctggaccc
caagctcctcagagacttgatccttctgccatcaggacttactcttgctaa
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