KEGG   Clarias gariepinus (North African catfish): 128511143
Entry
128511143         CDS       T10780                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cgar03009]
    128511143 (rrp9)
Ribosome biogenesis [BR:cgar03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    128511143 (rrp9)
SSDB
Motif
Pfam: WD40 Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd NBCH_WD40 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR41 WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_IP5PC_F Beta-prop_WDR75_2nd Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_HPS5 Beta-prop_VPS8 WD_LRWD1 Beta-prop_ACSF4 Beta-prop_IFT140_1st WDR54 Ntox15 DUF5836
Other DBs
NCBI-GeneID: 128511143
NCBI-ProteinID: XP_053339796
LinkDB
Position
23:23261782..23269995
AA seq 478 aa
MSFFIKKKSASVAAGKSEKSAGAKRKADQGGKGRPKKLNKRMNEEISSESENENDETRGR
KQKEADEDEEIEETPQEKKLRLAKLYLEQLREEEEKKAEDEEFESDLIAGRLREDVLEQR
GKLQRLIAEELLAPDPAEIRLLRGHKLAVTCLVITPDEKHIFSASKDCSIIKWEVESGRK
VQKIAGGRKGTEERHVGHTGHVLCMAISSDGKYLATGDMNKLIMIWEAATCKHLYTFTGH
RDAVSGLAFRRGTHDLYSASHDRSIKVWNVDENAYVETLFGHQDAITALDCLGRERCVTA
GGRDRTVRVWKIAEETQLVFYGHESSIDCVQLINEEHMVSGGDDGCLSIWSVSRKKPMTT
VKQAHGLHGNAGLEGPCWISSVAALHNSDTIASGASGSHNASVQLWKCGQGFRGLEPLFS
VPVKGFVNSLKFSNSGKFLVAGVGQEHRLGRWWRIKEAKNGLYIIPLKRQNKETTIEQ
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgtctttttttataaagaaaaaatccgcctcggtggccgctgggaaaagtgaaaagtct
gctggagcgaagcgaaaagctgatcagggtgggaaaggccgtccaaaaaaactcaacaag
cgcatgaatgaggaaatctccagcgaatcagaaaatgaaaacgatgaaacccgaggtcga
aagcagaaggaggcggatgaggacgaggagatcgaggagacgccgcaggagaagaagctg
cgcctggctaagctctacctcgagcagctgagagaggaagaggagaagaaggcagaggac
gaggagttcgagtcggacctgatagctggacgcttgcgtgaggacgtgctggaacagagg
ggcaaactgcagagactcatcgctgaagagctcctagcgccggatcctgcagaaatccgc
ctgctgagaggacacaagctcgccgtcacgtgtctggtcatcaccccggacgaaaaacac
atcttctccgcgtctaaagactgttccatcatcaagtgggaggtggagagcgggagaaag
gttcagaagatcgcaggagggaggaaggggacagaggagcggcacgtcggacacacggga
cacgtcctttgcatggccatttcatctgacggcaaatacctggccactggagacatgaac
aagctcatcatgatctgggaagctgctacgtgtaaacacctgtacaccttcacgggacac
agagacgccgtatcgggtttggcgttcaggagaggaacacatgacctgtatagcgcgtct
cacgatcgctcaatcaaagtctggaacgtggacgagaacgcttatgtagaaactctgttc
gggcatcaggacgccatcacggctttggactgccttggacgggagcggtgtgtgacggcg
gggggacgcgaccgaacggtccgagtgtggaagatcgccgaggagacgcagctcgtcttc
tacggtcacgagagctccatcgactgcgttcagctcatcaatgaggagcacatggtttca
ggaggggatgacggttgtttgtccatctggtctgtgagcaggaagaaaccaatgaccacg
gtgaagcaggctcacggtctccatggcaacgccggactggaagggccgtgctggatatca
tcagttgcagcgttgcacaactccgacactatagcttcaggtgcctcaggttcccataat
gcctctgtgcagttgtggaagtgcgggcaggggtttcgaggcctggagccgctcttctcc
gtcccggtgaagggtttcgtgaacagtttgaagttctccaactcgggcaagttcctggtg
gccggcgtaggacaggagcacaggctgggccgatggtggaggataaaggaggctaagaac
ggactttacatcattcctctcaaaagacagaacaaagagacgacgattgagcaataa

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