Clarias gariepinus (North African catfish): 128511148
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Entry
128511148 CDS
T10780
Symbol
taf4a
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128511148 (taf4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgar03021
]
128511148 (taf4a)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128511148 (taf4a)
Transcription machinery [BR:
cgar03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128511148 (taf4a)
Coactivators
SAGA/TFTC/STAGA complex
128511148 (taf4a)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
128511148 (taf4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
128511148
NCBI-ProteinID:
XP_053339805
LinkDB
All DBs
Position
23:complement(19962566..19984396)
Genome browser
AA seq
834 aa
AA seq
DB search
MVTTLPGHEVKLGTSTAQTLDGGDAMDPRSDSTPASSSDPASVPAPVNVTVPVVNNGPGV
AKGLANAPSTSGTVIQASFVTAPGGTPAIRPSMQPATLTINGSNSNAVLATAQPPVNASA
AAAPIKAESPQTVIQSAAHTGSPQVSPGAAKGAGLMHATTAVRGGAPVTGGVAPVAAAAA
AAAPTGGVRTIAPQQVLAPRLPQSTPGQASIHNIQLPPGMVLVRSEAGQLLMIPQQVLAH
MQATRATTPASTTPGQVTSTQTPGAPIMARPVTPTIIKQGSPTTSSTTAPALQRPPVQPP
SVGSVLAVQPGTAQRMVTPTTGTSVTLATETMENVKKCKNFLSTLIKLATSAKQSSQTAA
NVKDLVKNLLEGTIEAEDFTSRLYKELNSSPQPYLVPFLKRSLPALRKLTPDSLAFIQQS
QGLQPTKPAATVVLTNTTTANAATVAPTAPAASVPPVTLSISAGSVVTAAAAAVTAPRTL
TQPALATSSQPASLVLQPQQQAAIVKPPQVTLATPMVTLRGQPHSRIVVGQPQVQVKQLN
TVAVNPGMVSGAKVSPSPVALSAAQKNKLKDASGGTFKDDDDINDVASMAGVNLSEESAR
ILATNSELVGAVTRSCKDEAFLFSAALQRRILDIGKRFGVTDLGAEVVNLVSHATQQRLQ
NLLEKVTVIAQQKNMNYKEDARFEQVTDVRAQLKFFEQLDQREKQKKEEQEREILMKAAK
SRSRQEDPEQLRLKQKAKEMQQQELAQIRQRDANLTALAAIGPRKKRKLDSPALGTDAEG
SGSSSSSSVGLSGGTSRQFTRQRITRVNLRDLLFCLENERESSRSQLLYRALLK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggtaactactttgcctggtcacgaagtcaagctcgggacgtcaacagcgcaaactttg
gacggaggcgatgcgatggatccgcgttcagacagcacgccagcgtcatcgagcgatccc
gcgagcgttccagcgcccgttaacgttaccgtgccggtggtcaacaacgggcccggagta
gcgaaaggactcgcgaatgcaccttctacttcgggcacggtgatccaggcgtccttcgtg
accgcgccaggcggaacaccggccatcaggccgtctatgcaacccgcgactttaaccatt
aacgggagtaacagtaacgccgtgctcgccaccgcgcagcctcctgtcaacgcgagcgcg
gcggcggcaccgatcaaagccgagtcgccgcagaccgtgatccagagcgcggcacatacc
ggatctccgcaggtctcccctggggcagccaaaggcgctggactgatgcacgcgacgacg
gcggtgagaggcggggccccggtgacaggaggcgtggctccggtggcggcggcggcggca
gcagcagcccctacggggggcgtcaggactatcgcgccgcaacaggtgctcgcgccccgc
ctcccgcagagcaccccgggccaggcaagcatccacaacatccaacttcctccaggtatg
gtgttagtgcgaagcgaagcgggccagttgctcatgatccctcagcaagtgttggcacac
atgcaggccacacgtgccaccactcctgccagcaccacacccggacaggtcacctccaca
cagactcctggggctcccatcatggccagacctgtgactcccaccatcatcaaacagggc
tcacccacaaccagtagcaccactgctcctgcactgcagaggcctcctgtgcagccacca
tcggtgggctctgtgctggcagtgcagccaggcaccgcccagaggatggtaactcccact
acggggaccagcgtcaccttggcaacggagacgatggaaaacgtgaagaagtgtaagaac
tttctgtccacgctgatcaagctggcgaccagcgctaagcagtcatcgcagacggctgct
aacgtcaaagacctggttaagaacttgctggaagggacgattgaagcagaggactttacc
agcaggttatacaaggagcttaactcttcaccccagccttatctcgtgcctttcctcaag
aggagtcttcctgcgctgagaaagctcaccccggactccctggccttcatccagcagagc
caaggcctgcagcccactaaacctgcagccaccgtggtgctgaccaacactacgacggct
aacgctgccactgttgctcccaccgctcctgctgcatctgtccctcctgtgactctgtcg
atttctgcaggcagcgtcgttaccgccgcagctgctgcagtcacggccccgcgcacgctc
acccagcccgctctcgccacctctagccagcctgcctcactggtgttacagcctcagcaa
caggctgcgattgtgaagcctccccaagttaccctagctactccaatggtaacgctcagg
ggtcagccgcacagccgcattgtcgtggggcaacctcaagtgcaggtcaaacagctcaac
acagtggctgtgaatccggggatggtgagtggagcgaaggtctctcccagccctgtagct
ctgagcgcagctcagaagaacaagctgaaggatgcctccggggggacgttcaaggatgat
gacgatatcaatgacgtagcctccatggctggtgtaaacctgtcggaggagagcgcgcgg
atcctggccaccaactcggagttagtgggagccgtgactcgctcgtgcaaggatgaagcc
tttctgttctcagccgcgctgcagcgcaggatactggacatcggtaaacggttcggagtg
acagatctgggcgctgaggtggtcaacctggtttctcacgccactcagcaaagactgcaa
aaccttttagagaaagtcaccgtcatcgcacagcaaaagaacatgaactataaggaggac
gcacggttcgagcaggtgactgatgttcgagcacagctgaagttcttcgaacagctggac
cagcgggaaaaacaaaagaaggaagagcaggagagggagattctaatgaaggcagctaag
tctcggtctcggcaggaggacccagaacagttgcggttgaagcaaaaggccaaagagatg
cagcaacaggagcttgctcagataagacagagggacgcgaacctgacggcgctggctgct
atcggacccagaaaaaagaggaaacttgactcgcccgctcttggcactgacgcagagggt
tccgggtcttcatcgagctcgtctgtgggtttgagtggcggcacatcacggcagttcacc
cgccaacggatcacacgcgtaaacctcagggatctgctcttctgcctagaaaacgagaga
gagagcagtcgctcgcagctgctctaccgggctctgctcaaatag
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