Clarias gariepinus (North African catfish): 128511181
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Entry
128511181 CDS
T10780
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
128511181 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgar04515
]
128511181 (nfasca)
Cell adhesion molecules [BR:
cgar04515
]
Immunoglobulin superfamily
L1 family
128511181 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_6
Ig_5
Motif
Other DBs
NCBI-GeneID:
128511181
NCBI-ProteinID:
XP_053339863
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All DBs
Position
23:complement(16522583..16581627)
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AA seq
1371 aa
AA seq
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MWPQGQWAPLAVLSIILLLSEEATLIDVPADPRIQQDLKQPPTLIKQSAKDYIVDPRDNI
VIDCEAKGNPVPTFWWRRNGKFFNVEKDPRVSMRKRSGTVEISFRNGGKPEDYEGEYQCF
AMNDFGTAISNKILLRVSKAPLWPKEVLEPILISEGSSLVLRCNPPPGLPPPKTFWMDSK
MMPIVQDARVSMGLNGDLYFSNVLAKDANTDYSCNARFLFTHTIQQKNPFILKVQTKEPF
NDTVYSSNDTDVYGARNIQETTPTFLSPSGMSSSKLVLRGEELLLECIAAGVPTPRIKWF
KKGGELPEGKVKFENFNKTLVISSVSDEDSGDYICMASNKMGSIRHTISVQVKAAPFWLH
KPSNLVLAPNEAGQLQCLVRGNPKPSLQWLVNGEPIESSPDNPSRKVVGDAIIFNSVQIG
TSAVYQCNASNEHGYLLANAFVNILDMAPRLLGPKNQLIKVIENKQAFLDCPFFGSPYPY
VRWFKNGQGIVPNGGKYTLHENGTLEIKRVQPEDQGTYTFVASNILGKAEDQVRLEVKEP
TRIVQAPEHLSANKGTMARFNCKIKHDSTLPITVTWLKNDKPLNFFWPSRYKKDEDSMSF
SNIQSDDEGTYVCTVTTELDQDSASARLNVLEDESIAPSKPSALADRPDPPQDLELSDLS
ARSVRLTWIPGNENNSPVTQFLVQYEEDRWRPGEWQNLSSYAGDQNSVNLDLSPFVNYQF
RVIAINSVGQSRPSRPSARYQTSGAPPYVNPRGLKGWGTKNTNMEITWQPLLDNERNGPE
LRYVVSWRTKDSGEQWKNITTTNTKHVVTNTDTYVPYEIKIQAVNEFGSGPESNIVIGYS
GEDKPSEAPGNLRVTKVNSNKVNINWNPVEARSINGEFKEYRLYYWREASLVKDLKVNKD
KKTKGFFSDVSQSSGVLMDLVPYSKYKMYMVVANNKFEGLHSNTVEFQTKEGLPGAPKYF
RIVQRNSGVHLQWNKPLEPNGILIGYTLQYKTVNGTQEGNLQVMNFFPNQTEHTMQLPDR
FTRYKFFLSARTQVGSGEVYAEESPHFSNEDLTSSTDPTGVVIESTEVFMLATLPPLFSP
PTFPSTTITTSATTTIPPTTDAAPTTPAPTTTTTTTTTTTTTTTTTTTTTLPTLPFMLAP
RVKIWNLTVDANSDYANVSWKHNFPVDSSEFVLEFTLDSNGSMKTVLFKHEPPIKLAGLI
AGAKYRLRVYSHEQPSITSEYVTFETSGAYVTDQVDIATQGWFIGLMCAIALLILILLIV
CFIKRSRGGKYPVRDKKDLPLDPVDHKDQDGSFDYNSDEDNKPLQGSQTSLDGNVKESDD
SLVDYGEGGDGQFNEDGSFIGQYTVRKDKEETEGNESSEATSPVNAIYSLA
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgcaggggcagtgggctcctctggctgtgttgtcaatcatcttgctgctgtcg
gaggaggcgactctcatcgatgtgcctgcagacccaaggatccagcaggacttaaaacag
ccccccactttaataaagcagtcagctaaggactatattgtggatcccagagataacatc
gtcattgattgtgaggccaagggcaatcctgtaccaacgttttggtggagacgaaatggg
aagtttttcaatgtagagaaggatccccgtgtgtccatgaggaaacgctcaggcaccgtg
gagattagctttaggaatggaggaaagcctgaagactatgagggagaataccagtgcttt
gctatgaatgactttggcactgccatatccaacaaaatactgctcagagtttccaaggca
ccgctgtggcctaaagaggttttggagccaattttaataagtgagggatcatctctggtt
ctgcgctgtaacccacctcctggccttcccccacctaaaacattctggatggacagtaaa
atgatgcccatagtgcaggacgctcgagtgtccatgggtctgaacggagatctttacttc
tctaacgtgctcgctaaggatgccaacactgactacagctgcaatgcccgatttctcttc
acacacaccatccaacagaagaatcctttcatcctcaaagttcagacaaaggagcctttt
aatgacactgtgtactcttcaaatgacactgacgtgtatggtgcacggaacattcaagaa
acaacacctacctttctctctccctctggaatgtccagttccaaactggtgctccgtgga
gaggagcttctcctggagtgtatagctgctggagtaccaactcctagaattaaatggttt
aagaaaggaggagagttaccagaggggaaggtcaaattcgagaactttaataaaactctg
gtcatatcgtctgtgtcagatgaggattctggagactacatctgcatggccagtaataag
atgggcagcatccgccacactatctctgtccaggttaaagctgctcctttttggctacat
aagccatctaaccttgtcctggctcctaatgaggctggccagctgcagtgtttagtccgt
ggaaaccccaaacccagccttcagtggctggtaaacggagagcccatagagagttcaccg
gataatccaagtaggaaggtggttggtgatgcgatcattttcaactcagtgcaaattggc
accagtgctgtgtaccagtgcaatgcctcaaacgaacatggctacctgctggccaatgct
tttgtcaacatactggatatggcacctaggttattgggacccaagaaccagctgattaag
gtgatcgaaaacaaacaagcctttctggattgccctttttttggctcaccctacccatat
gtgcgatggtttaagaatggacagggcatagttccgaatggtgggaagtacaccttgcat
gagaatggaacgctggagatcaagcgagttcagcctgaagaccaaggaacgtatactttt
gtggcaagcaatatcctgggcaaagctgaagatcaggtccgtttggaagtcaaagagcca
acacggatcgttcaagctccagagcacctctctgccaacaaaggaactatggctcgtttt
aactgcaaaattaaacacgattctacactccccattactgttacctggctcaaaaacgac
aagcccctgaatttcttttggccgagcaggtataagaaggatgaggactcgatgtccttt
agcaacatccagtctgacgatgagggaacatacgtttgcacagttactacagagttagac
caggactctgcctctgcccgccttaatgttttagaggatgaatccatagctccctcaaaa
cctagtgccttagcagatcgtcctgatccccctcaggatctggagctgtctgatttatca
gcacgctctgtccggctcacctggatccccgggaacgagaacaacagtcctgttacacaa
tttcttgttcagtatgaagaggacaggtggcgtccaggtgaatggcaaaatttatcgagt
tacgcaggagatcagaattctgtgaacctggatctgtctccgtttgtgaactatcagttc
agagtgatcgccataaacagtgtgggtcaaagccgaccaagccggccatcagcccgctac
cagaccagtggagcacccccttatgttaatccccgtggccttaaagggtggggtactaag
aataccaacatggagatcacttggcagcccttactcgataacgaaaggaatggacctgaa
cttcgttacgtggtctcatggaggacgaaggactcaggggagcagtggaaaaacatcact
actaccaatacaaagcatgtggtcactaatacagacacttatgtcccctatgagatcaag
attcaggcagtcaacgagtttggttcaggtcctgagtcaaacatagtgattggctactca
ggagaggacaagccatctgaagcaccaggaaacctcagagtgacaaaagtaaacagcaat
aaagtgaatataaactggaaccctgttgaggccagatccattaacggagagtttaaggag
tacaggctatactactggagggaggccagcctggtgaaggacttaaaggtgaataaggac
aagaaaacaaaaggtttctttagcgatgtgtctcagagcagtggcgtcctgatggacctc
gtcccttacagcaaatacaagatgtacatggtggtggccaacaacaaattcgagggactg
cacagcaacacggtggagtttcagaccaaggaaggcttgccaggggcgcccaaatatttt
aggattgtccagaggaacagcggcgttcacttacagtggaataaacctctagaaccgaat
gggattctgatcggatacacactccaatacaagacagtgaatgggacgcaagagggcaat
ctccaggtcatgaacttcttccctaatcagacagagcacaccatgcaactgcctgatcgc
tttacccgctacaagtttttcctgtctgcccggacgcaggtcggctcgggtgaggtctat
gctgaggaatcgcctcatttttccaatgaagacttgacttcaagtactgaccctacaggt
gtagtgatcgagtctacagaagtcttcatgcttgcaactcttcctcccctcttttcccca
cctacattcccaagtacaaccattacaacctcagcaactaccaccattcccccaacaacc
gatgctgcccccactactcctgctccaactactacaactacaacaactactactacaact
actacaactacaactaccaccactacaactctccccaccctgcctttcatgctggccccg
cgtgtaaagatctggaatctgaccgtggatgctaacagtgactatgctaacgtcagctgg
aagcacaacttcccggttgacagcagcgagtttgtgctagagttcacactggacagtaat
gggtctatgaaaactgtgctgttcaaacatgaaccccccattaagctggctgggttgata
gctggagctaagtaccggctccgtgtgtattcccatgaacagcccagcatcaccagcgag
tatgtcaccttcgagaccagtggagcctacgttacagaccaagtcgacattgctacgcag
ggttggttcattggtctcatgtgtgccatcgcacttcttattctcatcctgctcattgtt
tgcttcatcaaaagaagccgaggagggaaatatccagtaagagataaaaaagacctccct
ttggacccggtggaccacaaagaccaggatggatcatttgattacaacagcgacgaggac
aacaagccattacagggaagtcagacctctctagacggcaacgtcaaggaaagtgacgac
agtctagtagactacggagagggaggggacggccagttcaatgaggacggctctttcata
ggccagtacacagtcaggaaggataaggaggagacggagggcaatgagagctcagaagcc
acatcacccgtcaatgccatatattctctggcatag
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