Clarias gariepinus (North African catfish): 128511252
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Entry
128511252 CDS
T10780
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128511252 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128511252 (irf6)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
128511252 (irf6)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128511252 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
128511252
NCBI-ProteinID:
XP_053340003
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All DBs
Position
23:26455837..26460324
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AA seq
474 aa
AA seq
DB search
MSVHPRRVRLKPWLVAQVDNGTFPGLVWLDREAKRFQIPWKHATRHTAQQEEENTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFNLIYDGTKEVPMNPLKIYDVCDIPAPL
SNPGSTGSAPTYDSDGEDDDVPDTPEPPPPPYHPPVGGSPLAPPVWTSPGSTSPMQPSPQ
VWPKKEPQDVEMSAPAAMEIQPASTMDTQPLTDMLFTTPETWISSLPMTDLEVQFYYRGK
EVCPTVTVSNPQGCRLFYGDLGPMVNQEELFGPVSLEQLRFPPTEHITNEKQRLFTSRLL
DVMDRGLILEISAHDIYAVRLCQCKVYWSGPCGPNANAPNLIERQRRVKLFCLETFLSSV
IAHQRGQSQSLPQFDIHLCFGEEWPDGRPRERKLIMVQVVPVVARILTEMFSSDGTRSFD
SSSVRLQISVPDIKDNIVTQLKQLYSLLQNHQGNEAWPLPSAGPAHLHHPLHAQ
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcaccctcggcgtgtgcggctgaagccgtggctcgtggctcaggtggataac
gggacgtttccaggtctggtgtggctcgaccgtgaagccaagcgtttccagattccatgg
aaacacgcaacacgacacacggctcagcaggaggaggagaacaccatcttcaaggcatgg
gctgtagagacaggaaagtttcaggaaggtgtagatgaacccgacccggccaagtggaaa
gctcagttacgctgcgcgctcaacaagagccgagagtttaacctcatctacgatggaacc
aaagaagttcccatgaaccccctgaagatctatgatgtgtgtgacatccccgcccccctc
agtaacccaggttccacaggatctgctcctacatatgactctgatggtgaagatgatgat
gttcctgatacaccagaacctccaccacctccatatcacccaccagtgggtgggtctcct
ctggccccacctgtgtggacttccccaggctccacctcccccatgcagccctcccctcag
gtgtggcctaagaaagagcctcaggatgtggagatgagcgcaccagcagccatggagatc
caacctgcatccaccatggacacacaacccttaactgacatgctgttcaccacaccagag
acctggatcagctctctgcccatgaccgatctggaggtacagttttattaccgtggtaag
gaggtgtgtcccacggtgacggtcagtaacccgcagggctgcaggctgttttacggggac
ttggggccgatggtgaatcaggaggagctctttggccccgtgagtctggagcagctgcgt
ttcccgcccactgagcacatcactaacgaaaagcagcgtcttttcaccagccgcctgctc
gacgtcatggaccgcggcctcatcctggagatcagcgcgcacgacatctacgccgtgcgt
ctctgccagtgtaaagtgtactggtcgggtccgtgcggtccaaacgccaacgcgcccaac
ctgatcgagcgccagcgccgggtcaaactcttctgcctcgagaccttcctcagcagtgtg
attgctcaccagcgtggtcagtctcagtctctgccccagtttgatattcacctgtgtttc
ggtgaggagtggcctgatggacgtcccagagagagaaaactcatcatggtgcaggtggtc
cctgtggtggcgaggatcctcactgagatgttcagctcagacggaacgcgctccttcgac
agctccagtgtgcgtctgcagatttctgtcccagacataaaggacaacatcgtcactcag
ctcaaacagctgtatagcctgctgcagaatcaccagggcaacgaggcctggcccctccca
tcggctggacccgcccacctgcaccaccccttgcatgctcagtga
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