KEGG   Clarias gariepinus (North African catfish): 128511330
Entry
128511330         CDS       T10780                                 
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
  KO
K13091  RNA-binding protein 23/39
Organism
cgar  Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgar03041]
    128511330 (rbm39a)
Spliceosome [BR:cgar03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    128511330 (rbm39a)
SSDB
Motif
Pfam: RRM_1 RBM39linker RRM_occluded RRM_5 PRP38_assoc RBD_DEAH11 RRM_7 RSRP
Other DBs
NCBI-GeneID: 128511330
NCBI-ProteinID: XP_053340109
LinkDB
Position
23:16192793..16198871
AA seq 529 aa
MADDFDIEAMLEAPYKKDETKSISSNGHEERSKKKKKSRSRSRSRERKRSKSRERKRSRS
QDKSRERKRSRSRDKKRSRSREKRRSRSKSRERAGRFRPAFSGLKFNGGPRGKTGPPPVI
KLSRKKSRSRSPFKREKSPVRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGK
VRDVRMISDRNSRRSKGIAYIEFVDATSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAAM
ANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITF
ADAECAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTTGRLQ
LMARLAEGTGLQIPPAAQQALQMSNSMVAMAAATAAMNPGLSFNINVPTNQPLNLPSQPI
ATHCFQLSNMFDPNSENDHGWDVEIQDDVIEECNKHGGVIHIYVDKKSAEGNVYVKCPSI
PAAMAAVSALHGRWFGGKMIKAAYVPLPTYHNLFPESVQATQLLMPTRR
NT seq 1590 nt   +upstreamnt  +downstreamnt
atggccgacgactttgacatcgaagccatgcttgaggcgccctataagaaggatgagacc
aagtcaataagttccaatgggcatgaagaacggagcaagaagaaaaagaagagcagaagt
cgtagtagaagcagggagagaaagagaagcaagagccgtgagcgcaaaaggagccggagc
caggataagagtcgtgaacgcaagaggagccggagccgggacaagaaacgcagtcgcagc
cgagagaagagacgtagccgttccaagagcagggagcgtgcagggcgcttcagaccagcc
ttttctggcctgaaatttaatggtggtcccagggggaagactggcccaccgcctgtcatc
aaactaagccggaaaaagtctaggagccgcagcccattcaaacgagaaaaaagtcctgtc
agacagcctatagataatctcacaccagaggagagggatgcccgcacagttttttgcatg
cagcttgctgccagaatccggccccgggacctagaggaatttttctctgctgtgggaaaa
gtaagggatgtgaggatgatctcagacagaaactctagaaggtccaaaggcattgcctac
attgaatttgtggatgccacctctgtaccactagcaattggtctgtctgggcaaaggctg
cttggggtaccaatcattgtgcaggcttcacaggctgaaaagaacagagctgctgcaatg
gccaacaaccttcagaaaggcagtgctggacccatgagactgtacgttggctcattgcat
ttcaacatcacagaagacatgctcagagggatctttgaaccatttggccgaattgacagt
attcagcttatgatggatagtgaaacagggagatccaagggatacggctttatcacgttt
gctgatgccgaatgtgcgaagaaggcattggaacagctaaatggctttgaactggctggc
aggcccatgaaagtaggccatgtgactgaacgcacagatgcctctacagccagctctttc
ctcgataacgatgagctggaaaggactggcattgacctgggcaccactgggaggctgcag
ctgatggccaggctggctgaaggcactggtctgcagatccctccagctgcacagcaggct
cttcagatgagcaactcgatggtggcaatggcagcagctacagcggctatgaatcctgga
ttaagtttcaatattaatgtgcccacaaatcaacctctcaatctaccatctcagccaatt
gccacacactgcttccagctgtccaacatgtttgatccaaattcggagaatgatcatgga
tgggatgttgaaatccaagatgatgtaattgaagaatgtaacaaacacggtggagtgatt
catatatatgtggacaagaaatctgctgagggaaatgtatatgtaaagtgcccaagcatc
cctgctgcaatggctgctgttagtgcattacatggacgctggtttggaggtaaaatgatc
aaagcagcatatgtccctctgccaacgtaccacaatctttttcccgagtcagtgcaagct
acacagcttcttatgcctactcgccggtga

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