Clarias gariepinus (North African catfish): 128511375
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Entry
128511375 CDS
T10780
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cgar04030
]
128511375
G protein-coupled receptors [BR:
cgar04030
]
Rhodopsin family
Vision
Opsin
128511375
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Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srsx
7TM_GPCR_Srw
7TM_GPCR_Srt
MpPF26
Motif
Other DBs
NCBI-GeneID:
128511375
NCBI-ProteinID:
XP_053340185
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All DBs
Position
23:16131422..16133403
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AA seq
358 aa
AA seq
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MAEQWGEAIFAARRRGDETTRESAFKYTNSNNTQDPFEGPNYHIAPRWVYNLSTCWMFFV
VVASTFTNGLVLVATAKFKKLRHPLNWILVNLAIADILETLLASTISVCNQFFGYFILGH
PMCVFEGFTVATCGIAGLWSLTVISFERWVVVCKPFGNVKFDGKWATGGIIFTWVWSGFW
TSLPIFGWSRYWPHGLKTSCGPDVFSGSEDPGVLSYMIALMITCCIMPLAVIILCYLAVW
MAIRAVAAQQKESESTQKAEKEVTRMIFVMIGAYCFCWGPYTFFACFASANPGYAFHPLA
AAMPAYFAKSATIYNPIIYVFMNRQFRSCIMQLFGKKVDDGSEVSSTSKTEVSSVAPA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcagtggggagaagctatctttgcagccaggcggcgaggtgatgaaacaaca
cgggaatcagccttcaaatacaccaacagcaataacacccaagatccatttgagggaccc
aactaccacattgccccaagatgggtgtacaatctttcaacgtgttggatgttttttgtg
gttgtggcctcaacattcaccaatggcctggtactggtagccacagccaaattcaagaag
ctccgtcaccctctgaactggatcttggtcaaccttgcaatagctgatattttagagaca
ctattggccagtactataagtgtctgtaaccaattttttggctattttatccttggacac
ccaatgtgcgtgtttgagggttttaccgtcgctacctgtggcattgctgggttgtggtct
ttgactgtcatttcatttgagagatgggtggtggtgtgtaaaccttttggaaatgtaaaa
tttgacggtaaatgggcaacgggaggcattatctttacttgggtctggtctggattttgg
acttcacttcctatttttggatggagcaggtactggcctcatggcctgaagacctcttgt
ggacctgatgtattcagtggaagtgaagaccctggagttctgtcttatatgattgcgctg
atgatcacctgttgtattatgccactggccgttatcattctctgctaccttgctgtttgg
atggcaatccgtgctgttgcagcacaacaaaaggaatctgaatcaacgcagaaagctgaa
aaggaagttaccagaatgatttttgttatgattggtgcttattgtttctgctggggacca
tacacattctttgcctgctttgcatccgctaaccctggttatgcctttcacccactggca
gcagctatgcctgcctactttgcaaagagtgccaccatctacaaccccattatctatgtt
tttatgaaccgacagttccgctcatgcatcatgcagctctttggaaagaaggtcgatgat
ggctctgaagtgtcttctacttccaaaacagaagtttcctctgtggcacctgcataa
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