Clarias gariepinus (North African catfish): 128511421
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Entry
128511421 CDS
T10780
Symbol
itga7
Name
(RefSeq) integrin alpha-7 isoform X1
KO
K06583
integrin alpha 7
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04510
Focal adhesion
cgar04512
ECM-receptor interaction
cgar04810
Regulation of actin cytoskeleton
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128511421 (itga7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128511421 (itga7)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128511421 (itga7)
04810 Regulation of actin cytoskeleton
128511421 (itga7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128511421 (itga7)
04515 Cell adhesion molecules [BR:
cgar04515
]
128511421 (itga7)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128511421 (itga7)
Cell adhesion molecules [BR:
cgar04515
]
Integrins
Integrin alpha subunits
128511421 (itga7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
CC2D2AN-C2
Motif
Other DBs
NCBI-GeneID:
128511421
NCBI-ProteinID:
XP_053340257
LinkDB
All DBs
Position
23:complement(3015536..3054198)
Genome browser
AA seq
1112 aa
AA seq
DB search
MALQLTVPVCMSMLLWSCVCGFNLETTDTLSKEGEHGSFFGFSLALHTQTTPHRQSWILV
GAPRARGPGHLRHTHTGALYRCPITAEEFDCERVEIDGDVRLDRESKDNQWLGVTVKSQG
IGGKVVTCAHLYELRQRVSQPSETRDPIGRCYVLSEDLSERDDLDGGEWKFCEGRPQGHE
QFGFCQQGLAASFTPDNNYILFGAPGTYNWKGEMHVQLLNQTVLDWGYYDDGPYEVADER
QLNAALIPLPYHSYLGFSVDSAKGVMQHSELTFIAGAPRANHTGAVVLLRKDNAYRLVPE
VILWGEELASSFGYSVSTSDLNQDGWTDLIVGAPNFFDRKAEIGGAVYVFLNPAGHWDEA
RPIRLNGTYDSMFGMTVSPAGDLDQDGYADFAVGAPFDGHGKVYIFRGSAEGLDTKPAQV
LDGSNAGVSRFGYSISGGLDIDGNLYPDLVVGSLTDQVVLFRARPVIHVVRDISVDPQHI
DLTQHTCTGRAGVCVEVKACYSYTAQPESYSPYITLGVHFEADTERRKSGLQHRVYFLGR
RSSEPEYTHSEELELRGQNHPACQTATFVLQENIRDKLRPVSLAITHTIKKTRHYGHGAD
HTHHRLGHLTPVLSLTPSNTLHSEVNFIREGCGDDNICQSNLKLSYRFGTRPSISDLFTA
LPIGEDGVPVFSLTDQRSVVLEVTVTNMPSDPAYPEENGDDAHAAQLTITLPHTLTYSGV
RGQVVCEANQNGSQAECELGNPLKRDAVLTFYIILSTSGITVETMSLSVDLQMSTISEQL
HLSPVTALARVVIELPLTVSGVARPHQLFFSGTVRGESAMETLEQTGSEVEVEFTVSNSG
QSLQTFGSAFLNIMWPHELANEKWLLYPTSLHSDHPHTHCTHRSALNSLSLKDTHTQQLQ
VRKTRSYPEEEGRAQRKSNVNDNTPAVSANERRKSLKLDCVLGSAKCVVFQCALQKFSGS
AKFTIKARLWNSTFIEEFSAVSVLEVLIRANISVRSNIKHLMLRDAAAQVSVMVYPELSV
LDQSWVPWWIILIAILAGVIVLALIVCILWKFGFFRRSPYKDSVPQYHAVRIRQQERSHL
HPDLQPEKSPKPEKNPTPHVKQWKTQWSDGAH
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcactccaacttacagtcccggtgtgtatgtccatgttactgtggtcatgtgtgtgt
ggctttaacctggagaccactgacaccctgagcaaagagggggaacatgggagcttcttc
ggcttctcacttgccctccatacgcagaccaccccccatcggcagagctggatcctggtg
ggggcaccgcgagctcgcggtccaggtcacctgcgtcacactcacacaggtgcgctgtat
cgctgtccaatcacagctgaggagtttgactgtgagcgagttgaaatcgatggagacgta
cgtttggacagagagagtaaagacaatcagtggctgggcgtgacggtgaagagtcagggc
atcggaggaaaagttgtgacttgtgctcacctgtacgagctccgacagcgcgttagccag
ccatccgagacgcgcgacccgatcggccgatgctacgtcctgagcgaagacctgagtgag
agagatgacctggatggaggagagtggaagttctgtgaaggtcgtcctcaaggtcacgag
cagttcgggttctgtcagcagggactggcggcgagcttcacccccgataataactacatc
ctgttcggagcgcccggaacctacaactggaaaggtgagatgcacgttcagctgctgaac
cagacagtgctggactggggttactacgacgacgggccgtatgaggtggcagatgaaaga
cagttaaatgctgcgttaattcctcttccatatcacagctacttggggttttcggtggac
tcagctaaaggagtgatgcagcactcagagttgacgttcatagccggagcgcctcgtgct
aatcataccggcgctgtagtgctgctgagaaaggacaacgcgtaccgccttgtccctgag
gtcatcctgtggggggaggagctagcatcctcgttcggatactccgtctctacaagtgac
cttaaccaggatgggtggacggatttaattgtgggcgctccaaactttttcgaccgtaag
gcagaaatcggcggggcggtgtacgtgttcctgaacccagccgggcactgggatgaggcg
cgacccatccgcctcaacggaacctacgactccatgtttggcatgacggtgagccctgcg
ggagaccttgaccaggatggatatgcagactttgcagtcggcgcaccatttgatggacat
gggaaagtatatattttcagaggttcagctgaaggactcgacactaaaccggctcaggtt
ctggacgggtcaaatgcaggagtgtcccgtttcggttactctatatccggaggtttggat
atcgatgggaatttgtacccggacctggtggtcggatctctcactgaccaggtggttctg
ttcagggcacggccggtgatccatgtggtcagggatatttcggtggacccgcagcacata
gacctgacgcagcacacctgtacgggccgagcgggagtgtgtgtggaagtgaaggcctgt
tacagctacacagctcagcctgagtcttactcaccttacatcactctcggggttcatttc
gaggcagacactgagcgcaggaaatcagggctgcagcacagagtttactttctgggtcga
aggtcatctgaacctgaatacactcattcagaggagctcgagctgagaggccaaaatcac
ccagcctgccaaaccgccacattcgtactgcaggagaacatcagagataaactgcgtccg
gtctcgctggccatcacacacaccataaagaagacgcgacactatggacacggtgctgat
cacacacaccatcgtctgggccacctcacccccgtgctgagtctcaccccttctaacaca
ctccactctgaggtgaacttcatcagagagggctgcggcgatgacaacatctgccagagt
aacctgaagctgagctacagatttgggacacgaccctcaatttcagatctcttcactgct
ttaccaataggtgaggacggtgtgcctgtgttttctcttactgatcagagatcagtggtt
ttggaagtgacagtgacgaacatgccctctgaccctgcctaccccgaggagaatggagac
gacgcccacgctgcccagctcacaatcacattgccacacacactcacctactccggagtc
aggggtcaggtggtgtgtgaggcgaatcagaatggctcccaggcagaatgcgagcttgga
aaccccctaaagagagatgctgtgttgacgttctacattattttgagcacgtcaggcatc
accgtggaaaccatgtctttatcagttgacctgcagatgtccacgatcagtgaacagctc
cacctgtctcctgttacggcacttgcccgagtagtgatcgaacttcctctgactgtcagc
ggtgtggctcgtcctcatcagctgttctttagtggaacagttcgaggtgagagtgcaatg
gagacgctggagcagacggggagtgaagtggaggtcgagttcactgtgtctaacagtgga
caatctctgcaaacttttggctcggcgttcctcaacatcatgtggcctcacgaactggcc
aatgaaaagtggctgctttacccgaccagtctacactcggaccatccacacacacactgc
acacaccgctcagcgctcaactcactcagcctcaaagacacacacacacagcagcttcag
gtgaggaaaactcgctcgtaccccgaggaggaaggacgagcacagaggaagagcaacgtg
aatgacaacacacctgctgtctccgctaacgagaggcgcaaatccctcaagctggactgt
gtgttaggttcggccaaatgtgtggtgtttcagtgcgcgctgcagaagttctccggttct
gccaagttcactatcaaagctcgtctctggaacagcacattcatagaggagttctcagca
gtcagtgtgttggaggtgttgatcagagcgaacatctcggtgaggtctaacattaaacat
ctgatgctgagagatgctgctgcacaggtgtcagtgatggtgtatcccgagctgagtgtg
ttggatcagtcatgggttccatggtggattatcctcatcgctatattagctggtgtaatc
gtcctcgctctgatagtttgtattctgtggaagtttggatttttccggaggtctccctat
aaggacagcgttcctcagtatcatgcagtgcgaatccgacaacaggaacgttctcatctc
caccccgacctacaacctgaaaaatcccccaaacctgaaaaaaaccccacaccacacgtc
aaacagtggaagacacagtggagtgatggcgcacattga
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