Clarias gariepinus (North African catfish): 128511426
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Entry
128511426 CDS
T10780
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128511426 (chd5)
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GFIT
Other DBs
NCBI-GeneID:
128511426
NCBI-ProteinID:
XP_053340266
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Position
23:7315469..7366058
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AA seq
1987 aa
AA seq
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MPGSLSNEEEGQDDLDFEDDVPDEDEEPEHVRVPLSPLEHFFSDDDSIKQKKKKASKQKE
GKMPKVKKKKKEGVSSEHEDVSDREDQRSGSESSSYGMLKKKKKKPREKKEKKGKWRKKD
DDDDDDDDDGNMKEPKSSSQLMEEWGLEDVQYAFSEDDYKTITNYKAFSQFLRPLIAKKN
PKIPMSKMMTVLGAKWREFSANNPFKGSSATAVAAAVAAAVETVNITPSISISSVQQLSP
MGQVKKAKTKEGKGPSARKKSKQPKDTKKKAKAKKPKLKAGQSSKRKKPSSSEDDFLDDF
SDFDDISIHSASVRSDASGVPKKKIKRGRKKRKREDGDGYETDHQDYCEVCQQGGEIILC
DTCPRAYHLVCLEPELEKAPEGRWSCPHCEKEGIQWEAKDEDEEEEEAAGEEEDDHMEFC
RVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMCPPLKGKVQKILHWMWGD
PPLPPEPLPTQDGKKDDIPVKPPLKGRPERLLFVKWAGLSYWHCSWVSELQLELYHTVMY
RNYQRKNDMDEPPPFDYGSGEEELNNEKRKSKDPQYAAMEERFYRYGIKPEWLIIHRILN
HSFDKDGDIHYLIKWRDLPYDQCTWEIDDFDVPEYDSFKHAYWDHREQMLGEDHRPLVVR
KGKRLKEELKRREAPPETPVVDPTVKFDQQPWFIDATGGTLHPYQLEGLNWLRFSWAQGT
DTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTIINWEREFEMWAPDFYVVT
YTGDKDSRAVIRENEFTFEDSAVKSGRKVFRMKKDTPVKFHVLLTSYELITIDQAILGSI
AWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNNLEELFHLLNFLTPERFN
NLDGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSPMQKKY
YKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGNLL
VKSSGKLTLLQKMLKKLKDDGHRVLIFSQMTKMLDLLEDFLEFEGYKYERIDGGITGGLR
QEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQ
NKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKTGSMSKQELDDILKFGTEE
LFKDDVEAIGDSKEGEEGNVIHYDDNAISKLLDRSQDATEDTEIQNMNEYLSSFKVAQYV
VREEDGEEEVQREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDT
SQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQSRRQLKSDRDKPLPPLLARVG
GNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLKGKTEKEFRAYVSLFMRHLC
EPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPAGLEL
KKLTESLSSDPNTPVPASPAPTQPSTPVPSDKPESGPVPPEDKDSAEHENMKAAESETCK
ESESCLQKTRESEELKSSGAEQKSNEDCEKKDDSSPEMDPLTNQTQTVGKQNEMSANQTS
PTGQQSKDLENPVEKTEKDASSAVKLEDKEPKHAAPHEPKSEDVTESQLNGEKETRDEVD
ENQKDEKNGAKARFMFNIADGGFTELHTLWQNEERVAVSSGKMYDIWHRRHDYWLLAGIV
THGYARWQDIQNDPRYAILNEPFKTEMNKGNYLEMKNKFLARRFKLLEQALVIEEQLRRA
AYLNMTQDSTHPAMALNTRFAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLS
DMKADVTRLPSMLSRIPPVSARLHMSERSILSRLTNREPQPQQPFPQGSFACSSMYSNSF
GGGFRGPPGAAMVNYSQMPLGPYVSVSSNGPPAPSSHMDKKSSEVLRDMSPPDLKSSKPS
DVICIED
NT seq
5964 nt
NT seq
+upstream
nt +downstream
nt
atgcccggatcgctgagcaacgaggaagagggccaagacgatttggattttgaagacgac
gtgccagatgaggatgaggagccggaacacgtccgtgtgcctctctcacctctggaacac
ttcttctcggacgatgattcgatcaagcagaagaaaaagaaagccagcaagcagaaagaa
ggcaagatgcctaaagtgaaaaagaagaagaaggagggcgtctccagcgagcatgaggat
gtgtcagacagggaggaccagcgctccgggagtgagagcagcagctacgggatgctaaag
aagaaaaagaagaagccgagagaaaagaaggagaagaaggggaagtggaggaagaaggac
gatgacgatgatgatgatgatgacgatggaaatatgaaggaacccaaatcttcaagtcag
ctgatggaggagtggggtctcgaggacgtccaatacgcgttctctgaggacgattacaaa
accatcaccaattacaaggccttcagccagtttctcaggcctctcatcgccaagaaaaac
cccaaaatcccaatgtccaagatgatgacggtattaggcgctaaatggcgcgagttcagc
gccaacaacccttttaaaggcagttcggcgacagccgtagctgccgcagtggcagccgca
gtggaaacggtcaacatcactccttccatctccatcagcagcgtccaacagctctctccc
atggggcaggtcaaaaaagccaaaaccaaagagggcaaggggccgagtgcaaggaagaag
agcaagcagccaaaggacacgaaaaagaaagcaaaagccaagaagcccaaattgaaagca
ggccagagcagcaagaggaaaaaaccctcctctagcgaggatgatttcttagacgatttc
tctgacttcgatgacatcagcattcacagtgcctccgttcgctccgacgcctcgggggtg
cccaagaagaaaataaaacgaggacgcaaaaagaggaaaagagaggatggagacggctac
gagacggaccatcaggactattgtgaggtgtgccagcagggcggtgagatcattctttgt
gacacctgcccccgagcttatcaccttgtgtgtctcgagcccgagctggagaaagccccc
gagggcagatggagctgccctcactgcgagaaggagggaattcagtgggaagcgaaggat
gaggacgaggaggaagaggaggctgcaggagaggaagaggacgaccacatggagttctgc
agagtgtgtaaagacggtggagagctgctgtgctgtgacacatgcccttcctcctaccac
atccactgcctgaaccctcctctgcccgagatccctaacggagagtggctgtgcccgcgc
tgcatgtgtccccctcttaaagggaaagttcaaaagattctgcactggatgtggggggat
ccacctctaccccccgaacctctccctactcaggatggtaagaaggatgatataccggtc
aaacctcctctaaagggtcgtcctgaaaggctgctgtttgtgaagtgggcggggctgtcg
tactggcactgttcctgggtcagcgagctacagttggagctttatcacacagtcatgtac
aggaactaccagcggaagaacgacatggacgaacctccgcccttcgactacggctcaggt
gaagaggagctgaacaacgagaagaggaagagcaaagacccgcagtatgctgctatggag
gagcgtttctatcgctatgggattaaacctgaatggctaatcatccaccggatcctcaac
cacagttttgacaaagatggagatattcactatttgatcaagtggagagatttaccgtac
gaccagtgcacctgggagatcgacgacttcgacgtacccgaatacgacagctttaaacac
gcctactgggaccatcgagagcaaatgctgggtgaagatcatcgtcccctagtggtgaga
aaaggaaaaagactgaaagaggagttgaagaggcgggaagctcctcctgagaccccagtt
gtggatcccactgttaaattcgaccaacagccgtggttcatcgatgctacaggaggaacc
ctgcacccataccagctagagggtctgaactggctacgtttctcctgggcacagggaacc
gataccatcctggctgatgaaatgggactgggcaagacagtgcagacgatcgtgttcctg
tactcgctctacaaagagggtcattcaaaaggtccgttcctggtcagcgctccattgtcc
actatcataaactgggagcgggaatttgagatgtgggctccggatttttatgtagtgacc
tacacgggcgataaagacagccgggcggtgatacgagagaacgagttcacatttgaagat
agcgctgtcaaatcaggacgcaaagtcttccgtatgaagaaagatacacctgtgaagttc
cacgtgctgttaacctcatatgagctgatcaccattgatcaggctattctaggctccatt
gcgtgggcatgtttggtcgtggatgaagcccatagattgaaaaacaaccaatctaagttt
ttcagaattctgaatggctacaagatttactacaagctgctcctaaccggcacgcccctg
cagaacaatctggaagagttattccacctgctgaatttcctcactccagagcgcttcaat
aatctggacggctttctcgaagagtttgctgatatttctaaagaagatcagattaagaag
ctgcatgacctgttggggcctcacatgctgcggaggctgaaggctgacgtcttcaagaac
atgccagccaaaacggagctaattgtgcgcgtagagctcagccctatgcagaaaaaatac
tacaagttcatcctgacacggaactttgaggctctgaattcgaaaggaggtggaaatcag
gtgtctcttctcaacatcatgatggacctgaagaaatgctgcaaccacccctacctgttc
ccagtggcagctgtggaagccccagtgttaccaaacgggtcgtacgatgggaacctgctg
gtgaagtcctcagggaaacttactctgcttcagaaaatgctcaagaagctcaaagatgac
ggacatcgcgtccttattttctcgcagatgacaaagatgctggacctgttagaggacttc
ctagagtttgaaggctataaatatgagcgtattgatggcgggataaccggaggactgcgg
caggaggccatcgatcgcttcaacgctccgggagcgcagcagttctgtttcctactgtct
actcgtgctgggggattgggaatcaatctagcaactgctgacacggtcattatctacgac
tctgactggaacccacataatgacattcaggcgttcagccgagcgcatcgtattggacag
aataagaaagtgatgatctatcgctttgtgacgcgggcgtcagtggaggagcggattacc
caggtggccaagcgcaagatgatgctcacacatctggtggtgcgtccaggcctgggctcc
aaaacaggatccatgtccaagcaggagctggatgacatcctgaagtttggcacagaggag
ctttttaaagatgatgtggaagctattggcgacagtaaggaaggagaggaaggcaatgtg
atccactacgatgataatgccatctccaagctgctggaccgcagtcaggacgccactgag
gacactgagatccagaacatgaacgagtacctcagctcctttaaggtggcccagtatgtg
gtgcgggaggaggacggagaggaggaggtgcagagggagatcattaaacaagaggagaac
gtggatcccgactactgggagaaactcctgcggcatcattacgagcagcagcaggaggat
ttggcacgcaatctggggaagggcaagcgcatccgcaagcaggtcaactataacgacacg
tctcaggaggaccaagaatggcaggacgacctttcagacaatcagtcagaatactcggtg
ggatccgaggatgaggatgaagatttcgaggagagacctgaagggggacggcgacagtct
cgcaggcagctgaagagcgaccgggacaaaccgctgcctccactgctagctagagtagga
ggaaacatagaggtacttggttttaacgcacgccagagaaaggccttcctgaacgctatc
atgcgctggggtatgcctcctcaagacgccttcaactcccattggctggtccgggacctg
aaggggaaaaccgaaaaagagttcagagcgtatgtttcgctgttcatgaggcacctgtgt
gagccgggagcggacggcgcggagacatttgcggatggcgtgcccagagagggtctctct
cggcaacacgtccttacccggatcggagttatgtctcttgtgaggaaaaaggttcaggag
tttgagcatgtaaatggcaaatacagcactccagatttgattcctgcaggcctggagctg
aagaagctcacagagagtctctcctcagacccaaacacccctgtaccagccagtcctgct
ccgactcagcccagcaccccagtaccatcagacaaacctgaaagtggtcccgttcctcca
gaagataaagacagtgctgagcatgagaacatgaaagcagctgagtctgagacatgcaaa
gaatccgagtcctgtcttcaaaagacgcgcgagagtgaagaactaaaaagcagtggcgct
gagcagaaatcaaacgaagactgcgagaaaaaagatgactcgtctcccgaaatggatcct
ttgaccaaccaaacgcaaacagtgggcaagcagaacgaaatgtcagccaatcaaacgtcg
ccaacaggacagcaaagtaaagacttggagaaccccgtggagaaaacggaaaaagatgct
tcttctgccgtgaagttggaggacaaagaaccaaaacatgctgctccccatgagcccaaa
tcggaggatgtcactgagagtcagctgaacggagagaaagaaacaagggacgaggtggat
gagaaccaaaaagatgaaaagaatggcgctaaggcacgcttcatgttcaacatcgcagac
ggaggctttacagagttacacactctatggcaaaatgaagaacgtgtcgctgtgtcatcc
ggtaagatgtacgacatctggcaccggcgccatgactactggcttttggctggcatcgta
actcacggctatgcgcgctggcaggacatccagaacgacccgcgctatgccatactcaat
gagcccttcaagactgagatgaacaaaggcaactacctggagatgaaaaacaagttcctg
gcacggaggttcaagctgttggagcaggctcttgtgattgaagagcagttaaggcgggca
gcttacctgaacatgacgcaggattccacacacccagccatggctcttaacacacgtttt
gctgaggttgagtgtctagccgagtcacatcagcacctctctaaagagtctctggcagga
aacaaaccggctaatgccgtactacacaaagtgctgaatcagctggaggaactgctgagt
gatatgaaggcggacgtgacaaggttgccatccatgctctcccgaatccctcctgtatcc
gctcggctccacatgtctgagaggagcatcctgagtaggcttaccaaccgtgagcctcag
cctcagcagcctttcccacagggatcttttgcctgttcttcaatgtacagcaacagtttt
ggtggaggatttcgaggtcctcctggagctgccatggttaactacagccagatgccgctg
gggccgtacgttagtgtgtcctcaaatggtcccccagcaccaagcagccacatggacaag
aagtccagtgaggttttgagagacatgtctccacccgacctcaaatccagcaaaccctcg
gacgtcatctgcatcgaagactag
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integrated database retrieval system
