Clarias gariepinus (North African catfish): 128511432
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Entry
128511432 CDS
T10780
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Membrane trafficking [BR:
cgar04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
128511432 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
128511432
NCBI-ProteinID:
XP_053340273
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All DBs
Position
23:complement(22902952..22916741)
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AA seq
1119 aa
AA seq
DB search
MSWFNASHLSSFAKQALSTAQKSIDRVLDIKEEDQWGDAITPSLDEVSSKPLSTGWGMNQ
WDSPSEESPKTLTPSSEAITTPVTRTVVDETESFFSAFLPPGDGQPVKKTSVVSVAPTKS
YRRPQENPENEMQPAAKDDVDSSMLSQEDVSQHSSEQVAETHPEEVQEKEETAVLEHAEE
NEETESKTETLDSSSSPQIPQVDPPAQPESVEKVESCGSAETKSSGKEPSKDTILESKDA
KAEDRQSDTPSPPVSAFSSGTSTTSDIEVLDHESVISESSASSRQETAEGKAGLHLMQGS
FQLLSASTCSDFPRLDDYPKLTESCGSSSDAFERIDSFSVHSLDSRSVSEVNSDDEIPGS
RTLASVTVGTSPLPALPPPPQANQEQEEVEGGTSDCAKDQSVEEMEESGRSATPVNSEQP
EELPEEEQESGSHLLLCNKRTEAGESHDSLTSPITEEQKGGSTCQLLELQKMVNELTSRL
ETRESQLLAVSKDKARLEEECDNLKDEMISLKEESSSVESLKDEFTQRIADTERKAQLAC
KERDIAKKEIKGLREELSTRFNSAETMELIREKEEQIRGLLEEGEKLSKQQLQHSNIIKK
LRAKEKESEVKIAKHSKKLKEQEDELKQLQQVLDAKEEIEKQHRESIKKLNSAVERQEKE
LSRLQSENDEVQEKNRSLQAALDAAYKELAELHKSNASKASEAQELALSREVQAKEELSL
ALDKAKEEARLQQEALANQVADLRLALQRAEQQQARKEDYLREEISELQQRLQGAETRNQ
ELSQSVTSATRPLLRQIENLQSTLGSQTVSWEKLEKNISDRLAEAQAQLAVAVEKERSVT
EEIHAVKAQLASLESQNSSLRQEKGRLQGQLEVEKTRREKLENDSSRERVELENLKGEYT
RTLEEAKKEKLLLTNQLEMEKVKVEQEKKKCYLAQEALKEKERKTLSVSLSEAPASSTPS
LSRSSSISGMDHGGIHTSLLPHDDSPDHSFASMTLPGNSLYEAARLSGGSSIIENLQSQL
KLREGEIAQLQVEISNLERTRSAMAEELVRLTNQNDELEDKVKEIPRLKVQLKDLEQRHN
TILQMYGEKAEEAEELRLDLEDVKNMYKTQIDELLKNQK
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgagttggtttaacgcttcacacctgtcgagtttcgctaaacaggctctgagcaccgca
cagaagtccatcgaccgagtcctggatattaaagaggaggaccagtggggcgacgccatc
actccgagtttagacgaagtctcgagcaagccattgtccacaggatgggggatgaaccag
tgggattctccttcagaggaaagcccgaagaccctcacaccttcatccgaggccatcacc
acgcccgtcacccgcacggtggtggatgaaacagagagtttcttcagtgccttcctgcct
cccggagatgggcagccggtcaagaaaacttcggtggtctccgtggcgccgaccaaatcc
taccgccggcctcaggagaaccccgaaaacgagatgcaacccgcagccaaggatgacgtc
gactcttccatgctttctcaggaagatgtgagtcaacacagcagcgaacaagtagcagag
acccacccagaggaggtgcaggaaaaagaagaaacagctgttctggagcacgcagaagaa
aacgaggagactgagagcaaaacagagacactggattccagttcaagtccacaaatccct
caagtggacccgcctgctcagcctgaatctgtagaaaaagtcgagagctgtggttctgct
gagactaagagctcggggaaagagccttctaaagacactattttggaatccaaagatgcg
aaagcagaagaccgtcagagcgacaccccatctcctcctgtgagcgccttctcgtccggg
acctccaccaccagtgacatcgaggttctggaccacgagagcgtcatcagcgagagctcg
gccagctcaagacaggagacggctgagggaaaagcggggctgcacctcatgcagggatcc
ttccagctgctctcggcctcgacgtgcagcgattttccgcgtctggacgactacccgaag
ctgacggagagttgcgggtcttcgtccgacgctttcgagcgcatcgactcctttagcgtg
cactctctggacagccgcagcgtcagcgaggtcaactcagacgacgagatccccggcagc
cgcaccctggcgtccgtcaccgtcgggaccagcccgctcccggctctaccgccaccacca
caggccaatcaggagcaggaagaggtggagggagggacgtctgactgtgcgaaggaccaa
tcggtggaagagatggaggagagcgggcgtagcgcgactcctgtgaactctgaacaacca
gaagagctgcctgaggaggagcaggagtccgggtcacatctcttgctgtgtaataaaaga
actgaagctggggagtcacatgactcgttgacatcacccataaccgaggagcagaaagga
ggctccacctgccagctcctggagctgcagaagatggttaacgagcttacgagcaggctg
gagacgcgggaaagccagctgctagcagttagcaaagacaaggcacgcctggaggaggag
tgcgacaacctcaaggatgagatgatcagtctgaaggaggagagctccagcgtggagtct
ctcaaagacgagttcacgcagcgcatcgccgacactgagaggaaagctcagctcgcctgc
aaggagcgtgacatcgccaaaaaggaaatcaagggtcttagagaggagctgtcaaccagg
ttcaactctgcggaaaccatggagttgatcagagagaaggaggaacagatcagaggcctt
ctagaagaaggtgagaagctgtccaagcagcagctgcagcactccaacatcatcaagaag
ctgagggccaaggagaaggagagcgaggtgaagatcgccaagcattccaagaagctcaag
gaacaagaggatgaactcaaacagctgcagcaggttctagatgcgaaggaggagattgag
aagcagcacagagagagcattaagaagctgaactctgccgtggagcgtcaggagaaggag
ctgagcaggctgcagagtgaaaacgacgaggtgcaagagaagaaccgcagcctgcaggcc
gccctcgacgccgcttacaaggagcttgccgagctgcacaagtccaacgcttcaaaggcc
agcgaggcacaggagctggctctcagccgcgaggtccaagccaaagaggagctcagcctg
gcattggacaaagccaaggaagaggcccgccttcagcaggaggcactggccaatcaggtg
gcagatctgaggttggctctgcagagagctgagcagcagcaggccaggaaggaggactac
ctccgagaggagatcagtgagcttcagcagcggttgcaaggggcggagaccagaaaccag
gaactgagtcagagcgttacctcggcgacgaggcccctcctgaggcagattgagaatctg
cagtcaactctgggatctcagacggtgtcctgggaaaagctggagaagaacatctcggac
cgcttagccgaggctcaggcccagcttgctgttgcggtagaaaaggagcgctcggtgaca
gaggaaatacatgccgtcaaggctcagttggcctccctggagtcccagaactcgtcactg
cgtcaggagaagggacggctgcagggccagctggaagtggagaagactcggcgtgagaag
ctggagaacgacagcagcagggagcgtgttgaactggagaatctgaaaggcgagtacact
cgtactctggaagaggccaaaaaggaaaagctgctgctaacaaaccagcttgagatggag
aaggtaaaggtggagcaggagaagaagaaatgctaccttgcacaagaagccttgaaggaa
aaggagcggaagacgctgagtgtatctctgagcgaggctcctgcatcctccacgccatct
ctctcccgctccagctccatcagcgggatggatcacgggggcatacacacctctctgctc
ccccacgacgactctcctgatcactcgttcgcctccatgaccctccccgggaacagcttg
tacgaggcggcgcgtctcagcggaggctccagcatcatcgagaacctgcagtcacagcta
aaactgcgggagggagaaatcgcacagcttcaggtggagatctcaaatctggagcggact
cgctcggcgatggcagaagaactggtgcggcttactaatcagaatgacgagctcgaggac
aaagtgaaggagatccccaggcttaaagtgcagctcaaggacctggagcagagacacaat
accatcctgcagatgtacggcgagaaggcggaagaagccgaggagctgcgtctcgacctt
gaagacgtcaagaacatgtacaagacccaaatcgacgagctgctcaagaaccaaaaataa
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