Clarias gariepinus (North African catfish): 128511436
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Entry
128511436 CDS
T10780
Symbol
lamb3
Name
(RefSeq) laminin subunit beta-3
KO
K06244
laminin, beta 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04382
Cornified envelope formation
cgar04510
Focal adhesion
cgar04512
ECM-receptor interaction
cgar04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128511436 (lamb3)
04518 Integrin signaling
128511436 (lamb3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128511436 (lamb3)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128511436 (lamb3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG14
DUF2203
MCAfunc
ATG17_like
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
128511436
NCBI-ProteinID:
XP_053340278
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All DBs
Position
23:complement(26400460..26407640)
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AA seq
1162 aa
AA seq
DB search
MKTLIILQITAALIAVCVAQQECVRGACYPPLGDLLTGQETELRASSTCGLTGIEVFCTP
LGQWKMKCCPCDSRIAAGPNAHTIQDVLSPAGPERWWQSKKDVSPVTIELNLKQLFHINN
LLLHFKGPRPDALVIERTSDFGRSWTPALYMATECQSSFPHVPTTPSDLDGPHCYTLPSN
TNNPFQDQRVYFHPLLQYSSIPVPHEEKIERLSGYTGLRVNLTRFGAVPYTPGRHPSRFY
ALKEMKLVGSCFCHGHSDRCLPDPASTHPSNTEMYSACDCQHNTAGVNCERCADLYNDLP
WQPAERDDTHTCKRCECNGHAQRCRFDSALYELSGRRSGGVCEECTHHTTGTHCERCAEN
YYRNPRSNMQRPDACLRCQCDNAGSEVRQQCDEVTGACLCKQNVGGARCDRCKPGYYGLS
SANLLGCSKCSCSSVGSLHSVCDEVTGQCVCRPNVGGRSCDRCADGFWNSSTGCRPCDCD
ITNAIGNTCDKLTGQCVCRPGFGGRTCSGCPENTYGDALTGCRSCVCDREGSVSGGCDRR
TGACVCKPGVVGDRCDMCGRGHCAQFPNCPVCPSCFFSLDAELQNLTLRLKHISDTLTHS
LPPRSPTHTLQRITDAQHTLRRITSALQQLPNDRDLYWNYTHHLNTLQSELKKVESDLKS
SGVVYPPDLEGELRRLQEQLSNINLEYNAKKQGATHSGSDYAGVLDAVKGAYNRSTDAVN
RVDETADTLDSSASVRGDAIKGLNDVQPINTQDLQTLGKDLATRPNLTPTATQVCGSGRV
LPCTPQQCEGELCPVDGAPPCVQGQKCVGALPWSQRAEQDTVEVKDKLQQLNDKITQAYT
QIQKSQDSTNQVRLSANELSNQMKRTRDDIDEGLKDIKDFVKNLKDFLSDPTADPAAVQR
VCDGVLGVKLPETVDALKNKLKEIQDVAASLPDTSTVLKNASSRLQEAQKLLENAENARD
TALGLQENTEEVLASLNDGEDALTDMEEKLKENLNIIDGVRNNIVNVEDVLLPVEGLVNE
GKGVVDTLRPLLDPLKEDVLRGRELAEEAGEKAEGAEHEANTAAKDLELLQQQLLKLKEN
TDTTNTTGAAGERLHTLQNDATDLIQETTDILNQLTDKEAGLRTLGEELMLNSHKLEGLE
SRLKELIRNISAKVNNLSGCVG
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgaagactctgatcattctacagatcactgcagcacttatagcagtgtgtgtggcgcag
caggagtgtgtgaggggggcatgttatcctccgctgggtgatttactgacaggccaagag
acggaactcagagcctcctctacatgcggcctcaccggcatcgaggtgttctgtacacct
ttaggacagtggaagatgaagtgttgtccatgtgactcgagaattgcagccggtccaaac
gcgcacacgatccaggacgtcctgagccccgctggacccgagcgctggtggcagagcaag
aaagatgtgagtcctgtcactatagagttgaacctgaagcagctgttccacatcaacaac
ctactactgcacttcaagggcccgcggccggacgcactggtgattgagaggacgtctgat
ttcgggaggtcgtggactccggccctctacatggccaccgagtgtcaatcctctttccct
cacgtcccgacgacgccctctgacctcgacggcccccactgctacacactgccctccaac
accaacaaccccttccaggaccagagggtgtatttccacccactgctgcagtactccagc
attcctgtaccacacgaagagaagattgagaggctgtcaggttacactgggctgcgtgtg
aacctgactcggtttggggcggtgccgtacacccctggccgacacccgtcacgcttctac
gccctgaaggagatgaagctggttggctcgtgcttctgtcacggccattctgaccgctgc
ctccctgaccccgcctccacacacccgtctaacacagagatgtacagtgcctgtgactgt
caacacaacacagcaggtgtgaactgtgagcgctgtgctgacctttacaatgaccttcca
tggcaaccagcagagagagacgacacacacacctgcaaacgctgtgagtgtaacggccac
gcccagcgctgccggttcgactccgccctgtatgagctgagcggccggcggagcggagga
gtgtgtgaggagtgtacacaccacaccacaggaacacactgtgagcgctgcgcggagaac
tattacaggaaccctcggagcaacatgcagagacctgacgcttgtttacggtgtcagtgt
gacaatgcagggtcagaggtcaggcagcagtgtgatgaagtaacaggggcgtgtctctgt
aagcagaatgtgggtggagctcgctgtgaccgctgtaaacccgggtactacggcctcagc
agtgccaacctgctgggctgctccaagtgctcctgcagttctgtcggctccctccacagt
gtgtgtgatgaagtgacaggacagtgtgtgtgcaggcccaacgttggaggaaggtcatgt
gaccggtgcgctgatggattctggaactcatcgacagggtgtcggccgtgtgactgtgac
atcaccaacgccatcggcaacacctgtgacaagctgacaggtcagtgtgtgtgtcgtcct
ggttttggcggtcgaacctgcagcggctgtcctgagaacacatacggagatgctctcacc
ggctgcagatcatgtgtgtgtgaccgcgagggcagtgtgtccggggggtgtgaccgtcgt
acaggcgcgtgtgtgtgtaagccaggtgtggtaggggacaggtgtgacatgtgtgggcgt
ggtcactgcgctcagttccccaactgccccgtctgcccgtcctgcttcttctcgcttgat
gcagagctgcagaacctcacgctccgtctgaagcacatttcagacacgctcacacactca
ctgcccccccgaagccccacacacacactgcaacgcatcacagacgcacagcacacactc
cggagaattaccagcgccctgcagcagcttcctaatgacagagacctgtactggaactat
acacaccatttaaacacactgcaatctgagttgaagaaggtggagtcggatttgaagagt
tcaggtgtagtttatcctccagacctggagggggagctgcgcagactgcaggaacagctg
tccaatatcaacttggaatacaacgccaagaaacaaggagcaacgcacagtggctctgac
tatgctggagtcctggatgctgttaaaggcgcctataatagatccacagacgcggtgaat
cgtgtggacgaaacagcagacacactcgacagctctgcatccgtcagaggcgacgccatt
aaaggcctgaatgacgttcagcccattaacacacaggacctgcagacgctcggaaaggac
ctggcaacccggcccaacctcacacctacagccacacaggtgtgtggcagtgggcgtgtg
ctgccatgtacccctcagcaatgcgagggcgaactgtgtcctgtagatggagcgccccct
tgtgtacagggacagaagtgcgtaggggcgttaccttggagtcagagggcggagcaagat
acggtggaggtgaaggacaaactgcaacaacttaatgacaagatcactcaggcatacaca
cagattcagaagtcccaggactcgaccaatcaggtgagactgtctgcaaacgagctgtcc
aatcagatgaagcgtacacgtgatgacatcgatgagggactgaaggacattaaagacttt
gttaagaacctgaaggacttcctgtcagacccgaccgctgaccctgcagcagtgcagcgt
gtgtgtgatggtgtgttgggggtgaaactgcctgagacggttgacgccctgaagaacaag
ctgaaagagattcaggacgtggctgcctcactgcctgacaccagcacggtcctaaagaac
gccagctcacgcctgcaggaggcgcagaaactactggagaacgccgagaacgccagggac
acagcactgggtctgcaggagaacactgaggaggttctggcgtctctgaatgatggtgag
gacgccctcactgacatggaggagaaactgaaggagaacctcaacatcattgatggagtc
aggaacaacatcgtgaacgtggaggacgttctgcttcctgttgagggtttagtgaatgag
gggaaaggggtagtggacacactgcgccccctgctggacccgctgaaggaggacgtgctc
agaggaagggaactagcagaagaggcgggggagaaggcagagggggcggagcatgaggcc
aatactgcagcaaaggacctggagttactacagcagcagttgttgaagctaaaggagaac
acagacacaacaaacactacaggtgcagcaggagagcgtctacacacactgcagaatgat
gcaacagacctgatccaggagactactgacatcctgaaccaactcacagataaggaggcg
gggctgcggacgctgggggaggagctaatgctgaactctcataaactagagggtttggag
tctcggctgaaggagctgatcaggaacatcagcgctaaagtcaacaacctgagtggctgt
gtgggctga
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