Clarias gariepinus (North African catfish): 128511480
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Entry
128511480 CDS
T10780
Symbol
bhlhe40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128511480 (bhlhe40)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
128511480 (bhlhe40)
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
DUF5365
Motif
Other DBs
NCBI-GeneID:
128511480
NCBI-ProteinID:
XP_053340338
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Position
23:23537319..23542300
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AA seq
404 aa
AA seq
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MERITSAQPPPPCLAKQNPLDMAGIPGMDFPMYVYKPRRGAKRGEDSKDTYKLPHRLIEK
KRRDRINECIAQLKDLLPEHLKLSTLGHLEKAVVLELTLKHVKALNSLLEQQQRQIISLQ
NGMQIGDHTNGGVEKSEEMFRSGFHLCAKEVLQYIASQENGQDLTPTHILNHLHKVASEL
PQRPVSPRQETPSPAHKVHEIHEKPVVAPPRMPEGHTKNCVPVIQRTYPHSSEQSGSDTD
TDSGYGGELDKDKRDSKGQRPSYYGKEGAELKYGIKEEWDEPQAKRQRSDSSEDESLLSH
SGYTGFSSHQPPFCMPFYLLPPVTAATAAAYLPVLEKCWYPGGMPMLYPGITGSPASLSP
EKLPLSLVLSPRVASPSASHVHTDSSALHQALKQVPPLNLETKD
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggagaggattaccagcgcgcaacctcctcctccatgcctggccaaacagaacccactg
gacatggctggcatcccgggcatggatttccccatgtacgtctacaaaccccggagaggc
gcgaaacgaggcgaggacagcaaggacacgtacaagctgccgcatcgtctgatcgagaag
aagcgacgtgacagaataaatgaatgcatcgcacagctgaaggacctgctcccagagcac
ctgaaactctctacgctgggccacttggagaaggccgtggtgctggaactgacgttgaag
cacgtgaaggctctgaacagcctgctggagcagcagcagcggcaaatcatatctctgcag
aatggaatgcagatcggtgatcacaccaacgggggcgtggagaagagcgaggagatgttc
cgttctggtttccatttgtgcgccaaggaggttttgcagtacatagcgagtcaggagaac
gggcaggatctgactcctacgcacatcttaaaccatctgcacaaggtggcctccgagctg
ccgcagcggccggtcagcccgcgtcaggaaacgccttcccctgcccacaaagtccatgag
atccacgagaagcccgttgtggcgccgcccagaatgccagagggccacaccaaaaactgt
gtccctgtgatccagaggacttacccgcatagcagcgagcagagtggcagcgacacggac
acggacagcggctatggtggcgagctggacaaagacaagcgtgactctaagggccagcgg
ccgagctactacggcaaagagggcgccgaactgaaatacggcatcaaggaggagtgggat
gagccgcaggccaagcggcaaaggtcggactcttccgaggacgagtctctgttgagtcac
agcgggtacacgggcttctcctctcaccagccacctttctgcatgcccttctacctcctt
cctccagtgacagcagccaccgccgccgcatacctccctgttctggagaagtgctggtac
ccagggggcatgcccatgctgtaccctggcatcacaggttccccagcgagcttgtcccct
gagaagctccccttgtcgcttgtcttgtcgcccagagtcgcgtcccctagcgcctctcat
gttcatacagactcttcggctctgcaccaggccctcaaacaagtgccccccttaaatctg
gaaaccaaagactga
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