Clarias gariepinus (North African catfish): 128511496
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Entry
128511496 CDS
T10780
Symbol
thoc7
Name
(RefSeq) THO complex subunit 7 homolog
KO
K13176
THO complex subunit 7
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03013
Nucleocytoplasmic transport
cgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128511496 (thoc7)
09122 Translation
03013 Nucleocytoplasmic transport
128511496 (thoc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgar03019
]
128511496 (thoc7)
03041 Spliceosome [BR:
cgar03041
]
128511496 (thoc7)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
128511496 (thoc7)
Spliceosome [BR:
cgar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
128511496 (thoc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC7
DUF6782
OVT1
COG6_N
Zw10_N
PMEI
DUF1351
Peptidase_S10
NAT
Suppressor_APC
DASH_Dad2
RasGAP_C
V_ATPase_I
APG6_N
Motif
Other DBs
NCBI-GeneID:
128511496
NCBI-ProteinID:
XP_053340354
LinkDB
All DBs
Position
23:complement(21633951..21637563)
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AA seq
203 aa
AA seq
DB search
MGTITDDEVIRKRLLIDGDGAGDDRRINVLLKSFIKWCHSNVTPEEGFAQYQRMLGSLSQ
CEFSMGKTLLVYDMNLKEMENYEKIYEDIEQSISAAHEKIAECKKEIQRAKRVRKNRQEY
DALAKVIQQHPDRHETMQQLEALDKELQHLSQIKENVEDKLELRKKQFHVLLSTIQELQQ
TLKNDEKMESDETSQESPMENGD
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccataactgatgatgaggtcattcgtaaacggctgcttatcgatggtgacgga
gcgggagacgacagacgcatcaacgtccttctgaaaagcttcatcaagtggtgccactca
aatgtgacgccggaagaaggatttgctcagtaccagaggatgctgggaagcttgtcgcag
tgcgagttctcgatgggaaagacgctcttggtgtatgacatgaacctgaaggagatggag
aactatgaaaagatctacgaagacatcgagcaaagcatctcagccgcgcatgagaaaatc
gcagagtgcaaaaaagagatccagagagcaaaaagagtacgaaagaaccgccaagagtat
gatgctttagcgaaagtcatccagcaacacccagacagacatgaaacgatgcagcagctt
gaagcgctggacaaagaacttcagcacctttcacaaatcaaagagaacgtagaagataag
ttggagctgcgtaagaaacagttccatgtcctcctcagtaccattcaggagcttcagcag
actcttaaaaatgatgagaagatggagagtgatgaaacgtcccaagaaagcccaatggag
aacggagattag
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