Clarias gariepinus (North African catfish): 128511499
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Entry
128511499 CDS
T10780
Symbol
optc
Name
(RefSeq) opticin
KO
K08127
epiphycan
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cgar00535
]
128511499 (optc)
Proteoglycans [BR:
cgar00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
128511499 (optc)
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRRNT
Motif
Other DBs
NCBI-GeneID:
128511499
NCBI-ProteinID:
XP_053340358
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All DBs
Position
23
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AA seq
324 aa
AA seq
DB search
MALYVVVAVALLGSCWAAPPVDSDLLNYDEDSDTWDLNSYGETYDYDVLDEEVENAGIVI
EVETMAPPAVATHLPPTVILENKTAAVTFPQTTKATIHPTLDFQGPGLFGPDTGLGLPTC
LLCVCLSGSVYCEDADLSEIPPLPKDTTHFYARFNKITAVKAKDFLNQNQLKRIDLKGNQ
ISNLDEDTFRTLPQLQDLFLADNRIMSLPELPATMRHIDVRNNRLTSAGIHREAFKEMKD
LQFLYLSDNRLDYIPVPLPESLRVLHLQNNNIQTLNEDTFCNSHDLSYVRKSLEDIRLDG
NPLDVNQYARAYVCLPRLPVGSSY
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtatgtagtggttgctgtggccctgcttggctcctgttgggcagctcctcca
gttgattctgatctgctgaattatgatgaggattcggacacatgggacctgaacagctat
ggagaaacctatgactatgatgtcttggatgaggaagttgagaatgcaggaattgtgatt
gaggtcgagactatggctcctcctgcagttgctactcatctacctcccacagttatcctt
gaaaacaaaacagcagcagtaacatttccacagaccaccaaagccacaatccatcctaca
ctggattttcagggccctggactttttggccctgacactggcctgggccttcccacctgc
ctgttgtgtgtgtgcctcagcggcagtgtgtattgtgaagatgctgatttaagcgagatc
cctcctctgcccaaagacaccacacacttctatgcccgctttaacaagataacagcggtc
aaggcaaaggactttcttaaccagaatcagttgaaacgaatcgacctaaaagggaatcag
atctccaatttggatgaggacaccttccgcactctcccacagctccaggacctattttta
gctgacaacagaattatgtctctgcctgagcttccagccactatgaggcacattgatgtt
cgcaataaccgtctgacgagtgctggcatacacagagaagcctttaaggaaatgaaagac
ttgcagttcctgtacctgtcagacaaccgactagattacattcctgtcccacttcctgag
agtctacgagtgcttcacttgcagaacaacaacatacagaccttgaatgaagacacgttt
tgcaacagtcacgacctcagctatgtacgcaagtctttggaagacattagattggacgga
aacccattggatgtgaaccaatatgctcgggcttatgtctgcctgccaagattgcctgtg
ggaagctcatactga
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