Clarias gariepinus (North African catfish): 128511542
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Entry
128511542 CDS
T10780
Name
(RefSeq) calmodulin-binding transcription activator 1-like isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128511542
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Other transcription factors
Others
128511542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CG-1
Ank_2
TIG
Ank
AGRB_N
Motif
Other DBs
NCBI-GeneID:
128511542
NCBI-ProteinID:
XP_053340420
LinkDB
All DBs
Position
23:complement(5176439..5436118)
Genome browser
AA seq
1792 aa
AA seq
DB search
MAAENKPEDEHGHLKIYLPKKLLECLPKCSSLPKERHRWNTNEEIAAYLISFEKHEEWLT
TSPKTRPQNGSMILYNRKKVKYRKDGYCWKKRKDGKTTREDHMKLKVQGVECLYGCYVHS
SIIPTFHRRCYWLLQNPDIVLVHYLNVPAIEDCGKPCGPILCSINTDKKEWAKWTKEELI
SQLKPMFHGIKWTCSNGNSSTGFSAEQLVQQILDSHQTKPPPRTHNCLCTGTLGAGSSLH
HKCNSAKHRIISPKVDPRSAGAYSSTHSEVQNSDVSEGKTEHTHGAGKNGRTTGDGAGGS
TAREKRNSKGTKPALLHQNSMEVSSTNQVEVPDTTQSSPVSISSGLNSDPDIADSPVVTG
MSHVASVMSSLSQSATVFMSEVTGDPVYSMSPTEDPSTHLLGPETASSSLVLAVAPDSHK
FAFPGAVGVGLGDVGSTERLAMLSAASMSEELVLSSSLESGSIKLPETTMNFDPDCFLNN
PKQGQTYGGNGLKTEVSNASSCSNGGVRCSPSLTDNGYGFNALLVKNIKTEDTSFEQQLA
KEGGYQVGEVVSGAGSLSSSSGSGSTQSSLALTPTSSLLQSGGGLSPSTTLEQMDFSAID
AKQDYSSTIMSATSYGQAIPSPQLAHQSHSPSFFLQGSPQSTQTQTHQNTSSSPQNSHDA
TAYMALSVVKTDSTGTNGHHHHHHHAHQGQHTASNCNGSSPTERNGQGGTLQLLQYQNRF
TGASKEHEEVGGLEQPANSEGQETGGQEKETEDLLKAGDHLQHCVGNGADGSGATEHYLQ
QSESTNIRAGGAGGTGTGTNNGALCNGTDGNRSTGSPHQQLQPLLQGAGLVQGLFNNMAA
HQALATSGANGGGMEISLDHFDVSFGNQFSDLINDFISVEGGNGAAISGQTGNALYSHQI
MAHSGTEGQVSSGGSSQQVAEEGTTHGTAGYNSGEICLQPCCSPQSAQPGALGSDTGQLA
YMQVDEVVSAAVAHGAMGMLQNTGRLFVVTDYSPEWSYPEGGVKVLITGPWQEASSDYTC
LFDQITVPASLIQPGVLRCYCPAHDTGLVTLQVAASSHIISNSVVFEYKARALPALPTSQ
HDWLSLDDNQFRMSILERLEQMERRMAEMSGQQQQGSGGSSESGVTGGGGGGGGGGGNAD
QTQLSPGQSQSPSQGQAGSSFESRVVVVCEKMMNRACWAKSKHLIHSKTFRGMTLLHLAA
AQGYANLIQTLIKWRTKHADSIDLELEVDPLNVDHFSCTPLMWACALGHTEAAVVLYKWD
RRALAIPDSLGRLPLATARSRGHTKLAEYLENLQREEQQQQAPAPSMPFSSNAESSTTDG
WMNVWGSETAPGIRATNVSSSALSSNQDLRRPRSEPSSFYTSESQGDAPLTKKHKPNPEI
HQARSSKPGSTPLGLGEQVHKSKTTRGGTADKEAGKGDKAQTKLSSACGGGRWSGKQASG
RRGPVGGLAKERLANRLRLREAPATGSVSELLLGQEDLENTGDLQLNMMTLAEHIIEATP
DRIKSENFVATESAPLDSVEVNSTMSWLATYLGDAERFLYSKPVPCSTGLGAGHTGSHPD
SEGPFGKFGLPSPADWSAFLNVSHSKKERDSTQLALSDHEQRELYEAARQVQSTFRKYKG
RPLREQQELAAAVIQRCYKKYKQVSSTSRRNSPVYLFSLVSSNVAFVSFFHKLTWIALKY
ALYKKMTLAAILIQSKFRSYYEQKKFQQSRRAAMLIQQYYRSYKELGRPNPHSHAAAAAV
LVQHKLRSGLLTKRQDQAARKIMRFLLRCRHRARELRKAKEHESSPKSPVTM
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgaaaacaagccggaagatgaacatggacatttgaaaatctacctgcctaag
aagctgctcgaatgtctgcccaaatgctcctccctgcccaaggagagacatcggtggaac
accaatgaggaaatcgctgcatacttgatatcattcgaaaagcatgaagagtggctaacg
acatcccctaaaaccaggccacagaatgggtctatgatcctgtacaacagaaagaaagtg
aagtacagaaaagacggctactgctggaagaagaggaaagatggcaagaccacgcgggag
gatcacatgaagctgaaagtgcagggagtcgagtgtctgtacggctgttacgtccactcc
tccataatccccaccttccaccgcaggtgttactggctgctccagaacccagacatcgtt
ctggtccactaccttaacgtcccagccatagaggattgtgggaagccatgcggtccaatc
ctgtgctcaatcaacaccgacaagaaggagtgggccaaatggaccaaggaggagctcatc
agccagctcaaacccatgtttcatggcatcaagtggacttgcagcaacgggaacagcagc
accggcttctcggctgagcagctggtgcagcagatcctggacagccaccagaccaagcca
cctccccggactcacaactgcctctgcacagggacactgggtgctggcagcagtctgcat
cacaagtgtaatagtgccaaacaccgcatcatctccccaaaggtcgacccgcgctctgca
ggtgcttacagcagtactcattctgaagtccagaacagtgatgtgtctgagggcaaaacc
gagcacacccatggagcgggcaaaaacggcagaacaacgggtgatggggcaggtggatcg
acagcacgggaaaagcggaacagcaaaggaacgaaaccggctctacttcatcagaacagc
atggaggtgtcctccaccaaccaggttgaggtaccagacaccacccaaagctcacctgtc
tccatcagcagcgggttaaactctgatccagacatcgccgacagcccggtggtgacaggt
atgagccacgtggcctccgtcatgagcagcctctcccagtccgccactgtcttcatgtcc
gaggtcacaggcgatcccgtgtacagcatgtctcccactgaagatcccagtactcatctt
ctagggccagaaacagcctcaagcagcttggtgctggcagtcgctcctgacagtcacaaa
tttgcttttcctggagctgtgggtgtgggtttaggagatgtagggtctacagagaggttg
gcaatgctctctgcagctagcatgtcagaagagcttgttctctctagcagcctagagtct
gggagcataaagctgcctgagactaccatgaactttgacccagactgcttcctcaataac
cccaagcagggccagacgtatggaggaaatgggctgaagacagaggtcagcaatgccagc
agctgcagcaatggaggggtccgctgttcgccttctctcactgacaatggttatggcttc
aacgccttactggtcaagaatataaaaactgaggacacatcatttgagcagcagctggcc
aaagaaggtggttaccaggttggagaggtggtcagtggtgcgggtagcctgtccagctcc
tcaggcagtggctctacccagagttcactggctctgacaccaactagctcattactccaa
tctggaggtggcctgagccctagcaccacactggagcagatggatttcagtgccattgat
gccaagcaggactactcttctaccataatgtctgctacaagctatggtcaagctataccc
agtccccagctggctcaccagagccactctcccagtttctttctgcagggctcaccccag
tccactcagactcaaacacaccagaacactagctcttctcctcagaactcacatgacgcc
actgcttacatggctttgtccgtagtcaagactgattcaacaggcaccaacggacatcac
caccaccaccaccatgctcatcaaggccagcacactgcatccaactgcaacggcagctca
ccaactgagagaaacgggcaaggtggcactctgcaacttctgcagtaccaaaaccgcttc
actggtgctagcaaagaacacgaggaagtaggaggactggaacaaccagccaactcggaa
ggtcaggagacaggtgggcaggagaaggagacagaagacttgctgaaggccggggatcat
ctgcaacactgtgtgggaaacggggctgatggcagcggagctacagagcactacctccag
caatcggagagcaccaacattagagcaggaggagcgggaggaacgggaacgggcacgaat
aatggagccctttgtaacggcaccgatggaaacaggtcaaccggcagtccgcatcagcag
ctccagccactcctacaaggagcagggctcgtccaggggctatttaacaacatggctgcc
caccaggctctggccacaagtggagctaatggaggaggaatggagatcagtctggatcac
tttgatgtctcgttcggaaatcaattttcagacctcatcaacgattttatttcagtggaa
ggaggaaacggtgcagcaatcagtggtcaaacgggcaacgcactctacagccatcagata
atggcccactcaggcacggaagggcaagtgtcatctggaggaagcagccaacaggttgct
gaagaggggaccacccatggaactgcagggtacaactctggagaaatctgtctgcagcct
tgttgcagcccgcagtcagcccagcctggggcattgggatcagacactgggcagttggcg
tacatgcaagtagatgaggtagtgtctgcagcagtagctcatggggccatgggaatgctt
cagaacactgggaggctgtttgtggtgacagactactcaccagagtggtcttacccagag
ggtggagtgaaagttttaattacaggaccatggcaagaggccagcagtgactacacttgc
ctgtttgatcagatcacggttcctgcctctctcattcagcccggagtgctgcgatgttac
tgcccagctcacgacacaggcctggtgacccttcaggtggctgccagcagccatatcatc
tccaactcggtggtgtttgagtataaagcacgtgctctccccgccctgcccacctctcag
cacgactggctctccctggacgacaaccagttcagaatgtcgatcctggagcgcctggag
cagatggagcgcaggatggctgaaatgtccggccagcagcagcaaggcagcggaggatcg
tctgaaagtggagtaacaggaggaggaggaggtggaggaggaggaggaggcaatgcagac
caaacgcagctctccccgggtcagagtcagagtccaagtcagggacaagctggaagctcc
ttcgaaagtcgagttgtggtggtgtgtgagaagatgatgaatcgtgcctgctgggcaaaa
tccaagcacttaatacactccaaaaccttccgtggcatgaccctgctccacctggcagct
gctcagggttatgccaacctgatccagactcttatcaagtggcgcactaagcatgcagac
agcatcgacctggagttagaggtggatcctttaaatgtcgaccacttctcctgcacccca
cttatgtgggcttgtgctttgggtcacacggaggcagccgtggttttgtataagtgggat
cgacgagccctggctatcccagattctcttgggcgcttaccgttggccacagctcgatcc
cggggccacaccaagctggcggagtatctggaaaatcttcagagggaagaacagcagcag
caggctccagcacccagtatgcctttctcctcaaatgcggaaagctccaccacggatggc
tggatgaacgtctggggaagtgagactgctcctggaataagagcgaccaacgtttctagc
tcggctctgagctcaaatcaagatttgaggagacccaggtctgaaccttccagcttctac
accagtgaaagccaaggagatgccccgttaactaagaaacacaaacccaatcctgaaatc
caccaagcgaggtcaagcaagcccgggtctacccctctcggtttaggagagcaagtccac
aaaagtaaaacaaccagaggaggtacagcggacaaagaggcaggaaaaggagacaaggct
cagacaaagctgagctcggcgtgcgggggcgggcgatggagcggcaaacaggcctcagga
cgcagagggccagttggaggactcgctaaagaaaggttggcgaacaggctgaggttacgg
gaagcacccgcaacgggatcggtctccgagcttctgctgggacaagaggatctggagaac
acaggggatctgcagctgaacatgatgactctggccgagcacatcatcgaagcaactcct
gatcgcatcaagagtgaaaactttgtggccacagagtcagcacctctggatagtgtggag
gtcaacagcactatgagctggttagctacataccttggagatgcagaaaggttcctatac
agcaagccggtgccatgctccacaggactaggcgccggccacactggcagccatcccgat
tctgaaggcccttttgggaaattcggacttccgtctccagcagactggagtgcatttctt
aatgtctctcacagcaagaaggagcgggattcaacccagctggccctgtctgaccacgag
cagagagagctttatgaggcagcgcgccaagtccagagtaccttccgcaagtataagggg
cgtccactcagagagcagcaggaactggcagctgctgttattcagcgctgttataaaaag
tacaagcaggtaagctcaacatctaggagaaattctcctgtatacctcttctctctagtc
agtagtaatgtcgcatttgtctctttcttccacaagctgacatggatagccttaaagtat
gcactttataagaagatgacgctggccgccatcctaatccagagtaaattccgcagctac
tatgagcagaagaagttccagcaaagtcgtcgggcagccatgctgatccagcaatactat
cgcagctacaaggagctgggccgacccaacccccattctcacgctgctgcagctgcagtc
ctggtgcagcacaagctcagaagcggtctgctcaccaagaggcaggaccaggccgccagg
aaaataatgcgatttctgctccgatgtcgccatagggcgagagaactgagaaaggccaag
gaacatgagagctcgccaaagagccccgtcacaatgtaa
DBGET
integrated database retrieval system
