Clarias gariepinus (North African catfish): 128511553
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Entry
128511553 CDS
T10780
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03013
Nucleocytoplasmic transport
cgar03015
mRNA surveillance pathway
Brite
Enzymes [BR:
cgar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128511553 (ddx19b)
Messenger RNA biogenesis [BR:
cgar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
128511553 (ddx19b)
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128511553
NCBI-ProteinID:
XP_053340440
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Position
23:complement(19011197..19018773)
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AA seq
477 aa
AA seq
DB search
MATDSWAQAVDQQEAAAESISTLQLNEKEEKPKAEENGAKAEGEKTEDEEKEDKAAQSLL
NKLIRSNLVNTTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLKGVYAMGFNRPSKIQENA
LPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNHRWPQCLCVSPTYELALQTGKVI
EQMGQYYPEVQLVYAIRGNKLERGVKLQEQIVIGTPGTVLDWCQKLKFIDPKKIKVFVLD
EADVMIATQGHQDQSIRIQRMLPKSCQMLLFSATFEETVWNFAKRIIPDPNVIKLKREEE
TLDTIKQYYVMCNSREEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQVAL
LSGEMQVEQRAAVIERFRNGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNET
YLHRIGRTGRFGKRGLAINMVDSRFSMNILNRIQEHFNKKIEKLDTDDLDEIEKIAN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggctacggattcctgggctcaggctgtggatcaacaagaagccgcagctgagtcgata
agcacccttcaattaaatgaaaaggaagaaaaaccaaaagcagaggaaaatggagccaag
gctgaaggagagaagactgaggatgaagaaaaagaggacaaagcggctcagtcattgtta
aacaaattgatacgaagcaacttggtgaacaccaccaaccaagtggaagttcttcagagg
gatccgaactctccgctttactcggtcaagtctttcgaggagctgcgattaaagcctcag
ctgcttaaaggtgtttatgccatgggcttcaacagaccatccaaaatccaggaaaatgcc
ttgcccatgatgctcgcagaaccgccacaaaatcttattgcccagtctcagtccggtacg
ggtaaaactgctgccttcgtcttggccatgcttagtcacgtggatcccaaccacagatgg
cctcagtgtctgtgtgtgtcgcctacatacgagctcgccctccagacgggcaaggtcatc
gagcagatgggccaatattaccctgaagtccagctggtgtatgcaatccgaggaaacaaa
ctggagagaggggtgaagctccaggaacagattgtgatcggcacccctggcacggtccta
gactggtgccaaaagctcaagttcatcgacccaaagaaaatcaaagtgtttgttttggat
gaggcagatgtcatgatcgctacacagggtcaccaagaccaaagcattcgcatccagagg
atgttgcccaaatcctgccagatgctcctgttctcggccacgttcgaggagacggtgtgg
aactttgccaagcgaatcatccccgacccaaacgtcatcaaactaaagagggaagaggag
acgctggacaccattaagcagtattacgtcatgtgtaacagcagggaggagaagttccaa
gccctgtgtaacatctatggtgccatcactatcgcacaggccatgatcttctgtcatact
aggaaaacagcaggctggctagcaggagagttgtcaagggagggccatcaggtggcgcta
ctcagcggcgagatgcaggtagaacagagagcagctgttatcgagcgtttccgcaacggc
aaagagaaagtcctggtcactacgaacgtctgtgccagaggtatcgatgtggagcaggtt
tctgtggttattaatttcgacttgcctgtggacaaggacggaaacccagacaatgagacg
tacctgcaccggatcggccgcacggggaggtttggcaagagagggctggcgatcaacatg
gtggacagcaggtttagcatgaacattctcaaccgcattcaggagcacttcaacaagaaa
atcgaaaaactggacacagatgatttggatgaaatcgagaaaatcgcaaactag
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